T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 145220..159011
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HXG32_RS00630 (pRi1724_p114) | 143489..144055 | + | 567 | WP_010900302 | conjugative transfer signal peptidase TraF | - |
| HXG32_RS00635 (pRi1724_p115) | 144045..145208 | + | 1164 | WP_010900303 | carbon-nitrogen hydrolase family protein | - |
| HXG32_RS00640 (pRi1724_p116) | 145220..145831 | + | 612 | WP_010900304 | TraH family protein | virB1 |
| HXG32_RS00645 (pRi1724_p117) | 146035..147600 | + | 1566 | WP_010900305 | Fic family protein | - |
| HXG32_RS00650 (pRi1724_p118) | 147691..147897 | - | 207 | WP_142845039 | helix-turn-helix transcriptional regulator | - |
| HXG32_RS00655 (pRi1724_p119) | 148115..148438 | + | 324 | WP_010900307 | transcriptional repressor TraM | - |
| HXG32_RS00660 (pRi1724_p120) | 148442..149146 | - | 705 | WP_142845038 | autoinducer binding domain-containing protein | - |
| HXG32_RS00665 (pRi1724_p121) | 149495..150793 | - | 1299 | WP_010900309 | IncP-type conjugal transfer protein TrbI | virB10 |
| HXG32_RS00670 (pRi1724_p122) | 150805..151245 | - | 441 | WP_010900310 | conjugal transfer protein TrbH | - |
| HXG32_RS00675 (pRi1724_p123) | 151249..152061 | - | 813 | WP_010900311 | P-type conjugative transfer protein TrbG | virB9 |
| HXG32_RS00680 (pRi1724_p124) | 152078..152740 | - | 663 | WP_010900312 | conjugal transfer protein TrbF | virB8 |
| HXG32_RS00685 (pRi1724_p125) | 152761..153942 | - | 1182 | WP_010900313 | P-type conjugative transfer protein TrbL | virB6 |
| HXG32_RS01045 | 153936..153983 | - | 48 | Protein_140 | entry exclusion protein TrbK | - |
| HXG32_RS01050 | 154020..154136 | - | 117 | WP_010900314 | DUF2749 domain-containing protein | - |
| HXG32_RS00695 (pRi1724_p127) | 154133..154930 | - | 798 | WP_010900315 | P-type conjugative transfer protein TrbJ | virB5 |
| HXG32_RS00700 (pRi1724_p128) | 154908..157358 | - | 2451 | WP_010900316 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HXG32_RS00705 (pRi1724_p129) | 157369..157668 | - | 300 | WP_010900317 | conjugal transfer protein TrbD | virB3 |
| HXG32_RS00710 (pRi1724_p130) | 157661..158044 | - | 384 | WP_010900318 | TrbC/VirB2 family protein | virB2 |
| HXG32_RS00715 (pRi1724_p131) | 158034..159011 | - | 978 | WP_010900319 | P-type conjugative transfer ATPase TrbB | virB11 |
| HXG32_RS00720 (pRi1724_p132) | 159021..159644 | - | 624 | WP_010900320 | acyl-homoserine-lactone synthase | - |
| HXG32_RS00725 (pRi1724_p133) | 160027..161235 | + | 1209 | WP_234886500 | plasmid partitioning protein RepA | - |
| HXG32_RS00730 (pRi1724_p134) | 161329..162336 | + | 1008 | WP_010900322 | plasmid partitioning protein RepB | - |
| HXG32_RS00735 (pRi1724_p135) | 162503..163714 | + | 1212 | WP_010900323 | plasmid replication protein RepC | - |