T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 8157..22794
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| R5G_RS24975 (R5G_48100) | 3348..3932 | - | 585 | Protein_4 | class 1 integron integrase IntI1 | - |
| R5G_RS24980 (R5G_48110) | 4078..4916 | + | 839 | Protein_5 | ANT(3'')-Ia family aminoglycoside nucleotidyltransferase AadA1 | - |
| R5G_RS24985 (R5G_48120) | 5033..5380 | + | 348 | WP_000679427 | quaternary ammonium compound efflux SMR transporter QacE delta 1 | - |
| R5G_RS24990 (R5G_48130) | 5374..6213 | + | 840 | WP_000259031 | sulfonamide-resistant dihydropteroate synthase Sul1 | - |
| R5G_RS24995 (R5G_48140) | 6341..6841 | + | 501 | WP_000376623 | GNAT family N-acetyltransferase | - |
| R5G_RS25000 (R5G_48160) | 7138..7425 | - | 288 | WP_012414174 | H-NS histone family protein | - |
| R5G_RS25005 (R5G_48170) | 7562..8155 | + | 594 | WP_012414173 | exported protein | - |
| R5G_RS25010 (R5G_48180) | 8157..8855 | + | 699 | WP_012443549 | lytic transglycosylase domain-containing protein | virB1 |
| R5G_RS25015 (R5G_48190) | 8977..9273 | + | 297 | WP_012196420 | KorA family transcriptional regulator | - |
| R5G_RS25020 (R5G_48200) | 9239..9544 | + | 306 | WP_031942907 | VirB2 family type IV secretion system major pilin TrwL | virB2 |
| R5G_RS25025 (R5G_48210) | 9557..9871 | + | 315 | WP_012196422 | VirB3 family type IV secretion system protein | virB3 |
| R5G_RS25030 (R5G_48220) | 9874..12345 | + | 2472 | WP_012196423 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| R5G_RS25035 (R5G_48230) | 12342..13031 | + | 690 | WP_012196424 | P-type DNA transfer protein VirB5 | virB5 |
| R5G_RS25040 (R5G_48240) | 13028..13258 | + | 231 | WP_012196425 | EexN family lipoprotein | - |
| R5G_RS25045 (R5G_48250) | 13272..14300 | + | 1029 | WP_012196426 | type IV secretion system protein | virB6 |
| R5G_RS25050 | 14413..14556 | + | 144 | WP_012196427 | trwH protein | - |
| R5G_RS25055 (R5G_48260) | 14553..15248 | + | 696 | WP_012196428 | VirB8/TrbF family protein | virB8 |
| R5G_RS25060 (R5G_48270) | 15259..16059 | + | 801 | WP_012196429 | P-type conjugative transfer protein VirB9 | virB9 |
| R5G_RS25065 (R5G_48280) | 16059..17246 | + | 1188 | WP_012196430 | type IV secretion system protein VirB10 | virB10 |
| R5G_RS25070 (R5G_48290) | 17212..18288 | + | 1077 | WP_012196431 | P-type DNA transfer ATPase VirB11 | virB11 |
| R5G_RS25075 (R5G_48300) | 18371..21271 | - | 2901 | WP_012196432 | MobF family relaxase | - |
| R5G_RS25080 (R5G_48310) | 21271..22794 | - | 1524 | WP_012196433 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| R5G_RS25085 (R5G_48320) | 22796..23161 | - | 366 | WP_012196434 | hypothetical protein | - |
| R5G_RS25090 (R5G_48330) | 23615..24040 | + | 426 | WP_012196435 | hypothetical protein | - |
| R5G_RS25095 (R5G_48340) | 24037..24732 | + | 696 | WP_012196436 | StbB family protein | - |
| R5G_RS25100 (R5G_48350) | 24746..25132 | + | 387 | WP_012196437 | hypothetical protein | - |
| R5G_RS25105 (R5G_48360) | 25286..25537 | - | 252 | WP_012196438 | hypothetical protein | - |
| R5G_RS25110 (R5G_48370) | 25685..26338 | - | 654 | WP_012196439 | hypothetical protein | - |
| R5G_RS25115 (R5G_48380) | 26354..26626 | - | 273 | WP_012443531 | hypothetical protein | - |
| R5G_RS25120 (R5G_48390) | 27391..27714 | - | 324 | WP_012196442 | TrfB-related DNA-binding protein | - |