T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 29888..54467
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HBA19_RS21560 (HBA19_21560) | 29888..32110 | - | 2223 | WP_166493876 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HBA19_RS21565 (HBA19_21565) | 32251..32784 | - | 534 | WP_166493877 | conjugal transfer protein TraS | - |
| HBA19_RS21570 (HBA19_21570) | 32781..35633 | - | 2853 | WP_166493878 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HBA19_RS21575 (HBA19_21575) | 35633..37003 | - | 1371 | WP_166493879 | conjugal transfer pilus assembly protein TraH | traH |
| HBA19_RS21580 (HBA19_21580) | 36990..37550 | - | 561 | WP_166493923 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HBA19_RS21585 (HBA19_21585) | 37543..37779 | - | 237 | WP_046360173 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HBA19_RS21590 (HBA19_21590) | 37791..38516 | - | 726 | WP_234608920 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HBA19_RS21595 (HBA19_21595) | 38660..40462 | - | 1803 | WP_206023462 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HBA19_RS21600 (HBA19_21600) | 40485..41153 | - | 669 | WP_240938381 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HBA19_RS21605 (HBA19_21605) | 41186..42178 | - | 993 | WP_166493882 | conjugal transfer pilus assembly protein TraU | traU |
| HBA19_RS21610 (HBA19_21610) | 42175..42807 | - | 633 | WP_166493883 | type-F conjugative transfer system protein TraW | traW |
| HBA19_RS21615 (HBA19_21615) | 42811..43143 | - | 333 | WP_166493925 | type-F conjugative transfer system protein TrbI | - |
| HBA19_RS21620 (HBA19_21620) | 43197..45824 | - | 2628 | WP_166493884 | type IV secretion system protein TraC | virb4 |
| HBA19_RS21625 (HBA19_21625) | 45881..46342 | - | 462 | WP_166493885 | hypothetical protein | - |
| HBA19_RS21630 (HBA19_21630) | 46345..46566 | - | 222 | WP_166493886 | TraR/DksA family transcriptional regulator | - |
| HBA19_RS21635 (HBA19_21635) | 46693..47229 | - | 537 | WP_166493926 | type IV conjugative transfer system lipoprotein TraV | traV |
| HBA19_RS21640 (HBA19_21640) | 47472..47840 | - | 369 | WP_166493887 | hypothetical protein | - |
| HBA19_RS21645 (HBA19_21645) | 47830..48273 | - | 444 | WP_166493888 | conjugal transfer protein TraP | - |
| HBA19_RS21650 (HBA19_21650) | 48266..49672 | - | 1407 | WP_166493927 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HBA19_RS21655 (HBA19_21655) | 49669..50376 | - | 708 | WP_240938383 | type-F conjugative transfer system secretin TraK | traK |
| HBA19_RS21660 (HBA19_21660) | 50390..50956 | - | 567 | WP_046360187 | type IV conjugative transfer system protein TraE | traE |
| HBA19_RS21665 (HBA19_21665) | 50974..51279 | - | 306 | WP_046360188 | type IV conjugative transfer system protein TraL | traL |
| HBA19_RS21670 (HBA19_21670) | 51295..51660 | - | 366 | WP_166493890 | type IV conjugative transfer system pilin TraA | - |
| HBA19_RS22000 | 51728..51895 | - | 168 | WP_240938384 | TraY domain-containing protein | - |
| HBA19_RS21680 (HBA19_21680) | 52269..52997 | - | 729 | WP_166493892 | PAS domain-containing protein | - |
| HBA19_RS21685 (HBA19_21685) | 53193..53576 | - | 384 | WP_166493893 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HBA19_RS21690 (HBA19_21690) | 53991..54467 | + | 477 | WP_046360192 | transglycosylase SLT domain-containing protein | virB1 |
| HBA19_RS21695 (HBA19_21695) | 54690..55517 | - | 828 | WP_046360193 | DUF932 domain-containing protein | - |
| HBA19_RS21700 (HBA19_21700) | 55570..55806 | - | 237 | WP_046360194 | hypothetical protein | - |
| HBA19_RS21705 (HBA19_21705) | 55894..56256 | - | 363 | WP_166493894 | hypothetical protein | - |
| HBA19_RS21710 (HBA19_21710) | 57045..57470 | - | 426 | WP_166493928 | IS200/IS605 family transposase | - |
| HBA19_RS21715 (HBA19_21715) | 57642..58367 | - | 726 | WP_166493895 | plasmid SOS inhibition protein A | - |
| HBA19_RS21720 (HBA19_21720) | 58364..58768 | - | 405 | WP_166493896 | conjugation system SOS inhibitor PsiB family protein | - |