T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 45613..54703
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GVI79_RS29265 (GVI79_28885) | 41644..41877 | - | 234 | WP_001191890 | hypothetical protein | - |
| GVI79_RS29270 (GVI79_28890) | 41859..42476 | - | 618 | WP_001249395 | hypothetical protein | - |
| GVI79_RS29275 (GVI79_28895) | 42644..45616 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| GVI79_RS29280 (GVI79_28900) | 45613..47478 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| GVI79_RS29285 (GVI79_28905) | 47528..48073 | + | 546 | WP_000228720 | hypothetical protein | - |
| GVI79_RS29290 (GVI79_28910) | 48030..48659 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| GVI79_RS29295 (GVI79_28915) | 48669..49115 | + | 447 | WP_000122507 | hypothetical protein | - |
| GVI79_RS29300 (GVI79_28920) | 49125..49502 | + | 378 | WP_000869297 | hypothetical protein | - |
| GVI79_RS29305 (GVI79_28925) | 49502..50164 | + | 663 | WP_001231464 | hypothetical protein | - |
| GVI79_RS29310 | 50345..50488 | + | 144 | WP_001275801 | hypothetical protein | - |
| GVI79_RS29315 (GVI79_28930) | 50500..50865 | + | 366 | WP_001052530 | hypothetical protein | - |
| GVI79_RS29320 (GVI79_28935) | 51010..51291 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| GVI79_RS29325 (GVI79_28940) | 51288..51914 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| GVI79_RS29330 (GVI79_28945) | 51898..52815 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| GVI79_RS29335 (GVI79_28950) | 52815..54128 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| GVI79_RS29340 (GVI79_28955) | 54125..54703 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| GVI79_RS29345 (GVI79_28960) | 54707..55099 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| GVI79_RS29350 (GVI79_28965) | 55384..56646 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| GVI79_RS29355 (GVI79_28970) | 56970..58115 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| GVI79_RS29360 (GVI79_28975) | 58209..58742 | + | 534 | WP_001221666 | lipocalin family protein | - |
| GVI79_RS29365 (GVI79_28980) | 58739..59056 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| GVI79_RS30845 (GVI79_28985) | 59313..59678 | + | 366 | Protein_86 | LuxR family transcriptional regulator | - |