T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 37512..64485
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV193_RS27555 (HV193_27575) | 33915..34457 | + | 543 | WP_020804853 | antirestriction protein | - |
| HV193_RS27560 (HV193_27580) | 34480..34902 | - | 423 | WP_020315406 | transglycosylase SLT domain-containing protein | - |
| HV193_RS27565 (HV193_27585) | 35407..35799 | + | 393 | WP_020804860 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HV193_RS27570 (HV193_27590) | 36037..36729 | + | 693 | WP_032426082 | conjugal transfer protein TrbJ | - |
| HV193_RS27575 (HV193_27595) | 36862..37068 | + | 207 | WP_176212272 | TraY domain-containing protein | - |
| HV193_RS27580 (HV193_27600) | 37130..37498 | + | 369 | WP_032744235 | type IV conjugative transfer system pilin TraA | - |
| HV193_RS27585 (HV193_27605) | 37512..37817 | + | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| HV193_RS27590 (HV193_27610) | 37833..38399 | + | 567 | WP_020804842 | type IV conjugative transfer system protein TraE | traE |
| HV193_RS27595 (HV193_27615) | 38386..39126 | + | 741 | WP_020804840 | type-F conjugative transfer system secretin TraK | traK |
| HV193_RS27600 (HV193_27620) | 39126..40550 | + | 1425 | WP_032744233 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HV193_RS27605 (HV193_27625) | 40543..41139 | + | 597 | WP_023316398 | conjugal transfer pilus-stabilizing protein TraP | - |
| HV193_RS27610 (HV193_27630) | 41162..41731 | + | 570 | WP_023316399 | type IV conjugative transfer system lipoprotein TraV | traV |
| HV193_RS27615 (HV193_27635) | 41863..42285 | + | 423 | WP_080901871 | hypothetical protein | - |
| HV193_RS27620 (HV193_27640) | 42326..43306 | + | 981 | WP_009310076 | IS5-like element ISKpn26 family transposase | - |
| HV193_RS28455 | 43288..43473 | + | 186 | WP_310585744 | hypothetical protein | - |
| HV193_RS27625 (HV193_27645) | 43478..43762 | + | 285 | WP_023316401 | hypothetical protein | - |
| HV193_RS27630 (HV193_27650) | 43786..44004 | + | 219 | WP_023316402 | hypothetical protein | - |
| HV193_RS27635 (HV193_27655) | 44005..44316 | + | 312 | WP_023316403 | hypothetical protein | - |
| HV193_RS27640 (HV193_27660) | 44383..44787 | + | 405 | WP_023316404 | hypothetical protein | - |
| HV193_RS27645 (HV193_27665) | 44784..45074 | + | 291 | WP_020323516 | hypothetical protein | - |
| HV193_RS27650 (HV193_27670) | 45082..45480 | + | 399 | WP_072156904 | hypothetical protein | - |
| HV193_RS27655 (HV193_27675) | 45552..48191 | + | 2640 | WP_047718076 | type IV secretion system protein TraC | virb4 |
| HV193_RS27660 (HV193_27680) | 48191..48580 | + | 390 | WP_032436749 | type-F conjugative transfer system protein TrbI | - |
| HV193_RS27665 (HV193_27685) | 48580..49206 | + | 627 | WP_023307538 | type-F conjugative transfer system protein TraW | traW |
| HV193_RS27670 (HV193_27690) | 49250..50209 | + | 960 | WP_029497356 | conjugal transfer pilus assembly protein TraU | traU |
| HV193_RS27675 (HV193_27695) | 50222..50860 | + | 639 | WP_020321224 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HV193_RS27680 (HV193_27700) | 50919..52874 | + | 1956 | WP_020803160 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HV193_RS27685 (HV193_27705) | 52907..53188 | + | 282 | WP_022644736 | hypothetical protein | - |
| HV193_RS27690 (HV193_27710) | 53178..53405 | + | 228 | WP_012540032 | conjugal transfer protein TrbE | - |
| HV193_RS27695 (HV193_27715) | 53416..53742 | + | 327 | WP_020323521 | hypothetical protein | - |
| HV193_RS27700 (HV193_27720) | 53763..54515 | + | 753 | WP_023316406 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HV193_RS27705 (HV193_27725) | 54970..55209 | + | 240 | WP_023316407 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HV193_RS27710 (HV193_27730) | 55181..55738 | + | 558 | WP_020804677 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HV193_RS27715 (HV193_27735) | 55784..56227 | + | 444 | WP_020804675 | F-type conjugal transfer protein TrbF | - |
| HV193_RS27720 (HV193_27740) | 56205..57584 | + | 1380 | WP_162492049 | conjugal transfer pilus assembly protein TraH | traH |
| HV193_RS27725 (HV193_27745) | 57584..60433 | + | 2850 | WP_032744228 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HV193_RS27730 (HV193_27750) | 60439..60966 | + | 528 | WP_020803849 | hypothetical protein | - |
| HV193_RS28265 | 61149..61817 | + | 669 | WP_020803846 | hypothetical protein | - |
| HV193_RS27740 (HV193_27760) | 61841..62101 | + | 261 | WP_020803850 | hypothetical protein | - |
| HV193_RS27745 (HV193_27765) | 62173..64485 | + | 2313 | WP_020803851 | type IV conjugative transfer system coupling protein TraD | virb4 |