T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 68850..100055
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV193_RS27075 (HV193_27095) | 63952..64302 | + | 351 | WP_004153414 | hypothetical protein | - |
| HV193_RS27080 (HV193_27100) | 64932..65285 | + | 354 | WP_004152748 | hypothetical protein | - |
| HV193_RS27085 (HV193_27105) | 65342..65689 | + | 348 | WP_004152749 | hypothetical protein | - |
| HV193_RS27090 (HV193_27110) | 65784..65930 | + | 147 | WP_004152750 | hypothetical protein | - |
| HV193_RS27095 (HV193_27115) | 65981..66814 | + | 834 | WP_004152751 | N-6 DNA methylase | - |
| HV193_RS27100 (HV193_27120) | 67634..68455 | + | 822 | WP_004152492 | DUF932 domain-containing protein | - |
| HV193_RS27105 (HV193_27125) | 68488..68817 | + | 330 | WP_011977736 | DUF5983 family protein | - |
| HV193_RS27110 (HV193_27130) | 68850..69335 | - | 486 | WP_022631514 | transglycosylase SLT domain-containing protein | virB1 |
| HV193_RS27115 (HV193_27135) | 69768..70157 | + | 390 | WP_004197733 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HV193_RS27120 (HV193_27140) | 70396..71070 | + | 675 | WP_004197737 | hypothetical protein | - |
| HV193_RS27125 (HV193_27145) | 71220..71438 | + | 219 | WP_172619300 | TraY domain-containing protein | - |
| HV193_RS27130 (HV193_27150) | 71488..71856 | + | 369 | WP_042946346 | type IV conjugative transfer system pilin TraA | - |
| HV193_RS27135 (HV193_27155) | 71870..72175 | + | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| HV193_RS27140 (HV193_27160) | 72191..72757 | + | 567 | WP_020804842 | type IV conjugative transfer system protein TraE | traE |
| HV193_RS27145 (HV193_27165) | 72744..73484 | + | 741 | WP_064182676 | type-F conjugative transfer system secretin TraK | traK |
| HV193_RS27150 (HV193_27170) | 73484..74887 | + | 1404 | WP_181469606 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HV193_RS27155 (HV193_27175) | 74933..75901 | - | 969 | WP_072269234 | IS5 family transposase | - |
| HV193_RS27160 (HV193_27180) | 75967..76563 | + | 597 | WP_023340943 | conjugal transfer pilus-stabilizing protein TraP | - |
| HV193_RS27165 (HV193_27185) | 76586..77155 | + | 570 | WP_023316399 | type IV conjugative transfer system lipoprotein TraV | traV |
| HV193_RS27170 (HV193_27190) | 77287..77697 | + | 411 | WP_023316400 | hypothetical protein | - |
| HV193_RS27175 (HV193_27195) | 77702..77986 | + | 285 | WP_023316401 | hypothetical protein | - |
| HV193_RS27180 (HV193_27200) | 78010..78228 | + | 219 | WP_023316402 | hypothetical protein | - |
| HV193_RS27185 (HV193_27205) | 78229..78540 | + | 312 | WP_023316403 | hypothetical protein | - |
| HV193_RS27190 (HV193_27210) | 78607..79011 | + | 405 | WP_023316404 | hypothetical protein | - |
| HV193_RS27195 (HV193_27215) | 79008..79298 | + | 291 | WP_023340940 | hypothetical protein | - |
| HV193_RS27200 (HV193_27220) | 79306..79704 | + | 399 | WP_074186017 | hypothetical protein | - |
| HV193_RS27205 (HV193_27225) | 79776..82415 | + | 2640 | WP_042946320 | type IV secretion system protein TraC | virb4 |
| HV193_RS27210 (HV193_27230) | 82412..82804 | + | 393 | WP_080816432 | type-F conjugative transfer system protein TrbI | - |
| HV193_RS27215 (HV193_27235) | 82804..83430 | + | 627 | WP_020314628 | type-F conjugative transfer system protein TraW | traW |
| HV193_RS27220 (HV193_27240) | 83474..84433 | + | 960 | WP_029497356 | conjugal transfer pilus assembly protein TraU | traU |
| HV193_RS27225 (HV193_27245) | 84448..84996 | + | 549 | WP_022631518 | hypothetical protein | - |
| HV193_RS27230 (HV193_27250) | 84971..85660 | - | 690 | WP_032427592 | hypothetical protein | - |
| HV193_RS27235 (HV193_27255) | 85717..86319 | + | 603 | WP_022631520 | hypothetical protein | - |
| HV193_RS27240 (HV193_27260) | 86463..87110 | + | 648 | WP_039698503 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HV193_RS27245 (HV193_27265) | 87169..89124 | + | 1956 | WP_148866277 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HV193_RS27250 (HV193_27270) | 89156..89410 | + | 255 | WP_004195500 | conjugal transfer protein TrbE | - |
| HV193_RS27255 (HV193_27275) | 89388..89636 | + | 249 | WP_004152675 | hypothetical protein | - |
| HV193_RS27260 (HV193_27280) | 89649..89975 | + | 327 | WP_004194451 | hypothetical protein | - |
| HV193_RS27265 (HV193_27285) | 89996..90748 | + | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HV193_RS27270 (HV193_27290) | 90759..90998 | + | 240 | WP_009309875 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HV193_RS27275 (HV193_27295) | 90970..91542 | + | 573 | WP_063160290 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HV193_RS27280 (HV193_27300) | 91535..91963 | + | 429 | WP_004152689 | hypothetical protein | - |
| HV193_RS27285 (HV193_27305) | 91950..93320 | + | 1371 | WP_009309877 | conjugal transfer pilus assembly protein TraH | traH |
| HV193_RS27290 (HV193_27310) | 93320..96193 | + | 2874 | WP_048979483 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HV193_RS27295 (HV193_27315) | 96928..97620 | + | 693 | WP_009309879 | hypothetical protein | - |
| HV193_RS27300 (HV193_27320) | 97746..100055 | + | 2310 | WP_009309880 | type IV conjugative transfer system coupling protein TraD | virb4 |