T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 13043..29467
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTD13_RS00055 (D616_p124014) | 8066..8575 | + | 510 | WP_000129958 | antirestriction protein ArdA | - |
| HTD13_RS00060 (D616_p124016) | 9407..9586 | + | 180 | WP_000214483 | protein CcgAI | - |
| HTD13_RS00065 (D616_p124017) | 9641..9961 | + | 321 | WP_000211833 | protein CcgAII | - |
| HTD13_RS00070 (D616_p124019) | 10072..10416 | - | 345 | WP_015059326 | hypothetical protein | - |
| HTD13_RS00075 (D616_p124020) | 10598..10966 | - | 369 | WP_000414913 | plasmid stabilization protein StbC | - |
| HTD13_RS00080 (D616_p124021) | 10968..11684 | - | 717 | WP_000861577 | StbB family protein | - |
| HTD13_RS00270 | 11693..12112 | - | 420 | WP_000802909 | plasmid stabilization protein StbA | - |
| HTD13_RS00090 (D616_p124023) | 12625..13041 | + | 417 | WP_001532083 | hypothetical protein | - |
| HTD13_RS00095 (D616_p124024) | 13043..14572 | + | 1530 | WP_000342688 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| HTD13_RS00100 (D616_p124025) | 14572..17808 | + | 3237 | WP_015059325 | MobF family relaxase | - |
| HTD13_RS00105 (D616_p124026) | 17808..18434 | + | 627 | WP_000434930 | DUF6710 family protein | - |
| HTD13_RS00110 (D616_p124027) | 18608..19141 | - | 534 | WP_000731968 | phospholipase D family protein | - |
| HTD13_RS00115 (D616_p124028) | 19141..20136 | - | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HTD13_RS00120 (D616_p124029) | 20178..21338 | - | 1161 | WP_000101711 | type IV secretion system protein VirB10 | virB10 |
| HTD13_RS00125 (D616_p124030) | 21338..22222 | - | 885 | WP_000735067 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HTD13_RS00130 (D616_p124031) | 22233..22931 | - | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| HTD13_RS00135 (D616_p124032) | 22921..23079 | - | 159 | WP_012561180 | hypothetical protein | - |
| HTD13_RS00140 (D616_p124033) | 23150..24190 | - | 1041 | WP_000886022 | type IV secretion system protein | virB6 |
| HTD13_RS00145 (D616_p124034) | 24206..24433 | - | 228 | WP_000734973 | IncN-type entry exclusion lipoprotein EexN | - |
| HTD13_RS00150 (D616_p124035) | 24441..25154 | - | 714 | WP_000749362 | type IV secretion system protein | virB5 |
| HTD13_RS00155 (D616_p124036) | 25172..27658 | - | 2487 | WP_031942423 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HTD13_RS00160 (D616_p124037) | 27773..28090 | - | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| HTD13_RS00165 (D616_p124038) | 28140..28433 | - | 294 | WP_000209137 | TrbC/VirB2 family protein | virB2 |
| HTD13_RS00170 (D616_p124039) | 28443..28724 | - | 282 | WP_000440698 | transcriptional repressor KorA | - |
| HTD13_RS00175 (D616_p124040) | 28733..29467 | - | 735 | WP_000033783 | lytic transglycosylase domain-containing protein | virB1 |
| HTD13_RS00180 (D616_p124041) | 29510..29881 | + | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| HTD13_RS00185 (D616_p124042) | 29897..30274 | + | 378 | WP_000504251 | hypothetical protein | - |
| HTD13_RS00190 (D616_p124043) | 30237..30551 | + | 315 | WP_000734776 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HTD13_RS00195 (D616_p124044) | 30665..30898 | + | 234 | WP_001191790 | hypothetical protein | - |
| HTD13_RS00200 (D616_p124046) | 30954..31595 | + | 642 | WP_001694850 | restriction endonuclease | - |
| HTD13_RS00205 (D616_p124047) | 31600..31797 | + | 198 | WP_000844102 | hypothetical protein | - |
| HTD13_RS00210 (D616_p124048) | 31859..32563 | - | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| HTD13_RS00215 (D616_p124050) | 32921..33796 | + | 876 | WP_013188473 | extended-spectrum class A beta-lactamase CTX-M-1 | - |
| HTD13_RS00220 | 33843..34247 | - | 405 | WP_223951531 | WbuC family cupin fold metalloprotein | - |
| HTD13_RS00275 | 34186..34428 | - | 243 | Protein_44 | MFS transporter | - |