T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42688..71055
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ND440_RS17405 (ND440_17400) | 39180..39497 | - | 318 | WP_050289016 | hypothetical protein | - |
| ND440_RS17410 (ND440_17405) | 39507..39965 | - | 459 | WP_315861869 | phospholipase D family protein | - |
| ND440_RS17415 (ND440_17410) | 40449..42626 | - | 2178 | WP_265317724 | F-type conjugative transfer protein TrbC | - |
| ND440_RS17420 (ND440_17415) | 42688..43689 | - | 1002 | WP_265317725 | hypothetical protein | trbB |
| ND440_RS17425 (ND440_17420) | 43712..45040 | - | 1329 | WP_265317726 | conjugal transfer protein TrbA | trbA |
| ND440_RS17430 (ND440_17425) | 45196..45723 | - | 528 | WP_050289011 | hypothetical protein | - |
| ND440_RS17435 (ND440_17430) | 45743..47854 | - | 2112 | WP_265317727 | DotA/TraY family protein | traY |
| ND440_RS17440 (ND440_17435) | 47983..48588 | - | 606 | WP_226723032 | conjugal transfer protein TraX | - |
| ND440_RS17445 (ND440_17440) | 48581..49810 | - | 1230 | WP_120806751 | conjugal transfer protein TraW | traW |
| ND440_RS17450 (ND440_17445) | 50001..53075 | - | 3075 | WP_120806750 | type IV secretory system conjugative DNA transfer family protein | traU |
| ND440_RS17455 (ND440_17450) | 53078..53683 | - | 606 | WP_050074479 | hypothetical protein | traT |
| ND440_RS17460 (ND440_17455) | 53774..54178 | - | 405 | WP_108088340 | DUF6750 family protein | traR |
| ND440_RS17465 (ND440_17460) | 54193..54723 | - | 531 | WP_050074337 | conjugal transfer protein TraQ | traQ |
| ND440_RS17470 (ND440_17465) | 54732..55469 | - | 738 | WP_234049652 | hypothetical protein | traP |
| ND440_RS17475 (ND440_17470) | 55469..56680 | - | 1212 | WP_265317532 | conjugal transfer protein TraO | traO |
| ND440_RS17480 (ND440_17475) | 56685..57695 | - | 1011 | WP_050289002 | DotH/IcmK family type IV secretion protein | traN |
| ND440_RS17485 (ND440_17480) | 57698..58372 | - | 675 | WP_050074341 | DotI/IcmL/TraM family protein | traM |
| ND440_RS17490 (ND440_17485) | 58457..58942 | - | 486 | WP_234049650 | hypothetical protein | traL |
| ND440_RS17495 (ND440_17490) | 58952..62140 | - | 3189 | WP_265317728 | LPD7 domain-containing protein | - |
| ND440_RS17500 (ND440_17495) | 62199..62465 | - | 267 | WP_050074346 | IcmT/TraK family protein | traK |
| ND440_RS17505 (ND440_17500) | 62465..63622 | - | 1158 | WP_265317729 | plasmid transfer ATPase TraJ | virB11 |
| ND440_RS17510 (ND440_17505) | 63609..63902 | - | 294 | WP_265317730 | hypothetical protein | - |
| ND440_RS17515 (ND440_17510) | 63936..64724 | - | 789 | WP_120806743 | type IV secretory system conjugative DNA transfer family protein | traI |
| ND440_RS17520 (ND440_17515) | 64721..65176 | - | 456 | WP_120806742 | DotD/TraH family lipoprotein | - |
| ND440_RS17525 (ND440_17520) | 65221..66600 | - | 1380 | WP_265317731 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| ND440_RS17530 (ND440_17525) | 66590..67258 | - | 669 | WP_120806741 | prepilin peptidase | - |
| ND440_RS17535 (ND440_17530) | 67255..67725 | - | 471 | WP_234049647 | lytic transglycosylase domain-containing protein | virB1 |
| ND440_RS17540 (ND440_17535) | 67735..68343 | - | 609 | WP_120806739 | type 4 pilus major pilin | - |
| ND440_RS17545 (ND440_17540) | 68365..69492 | - | 1128 | WP_234049646 | type II secretion system F family protein | - |
| ND440_RS17550 (ND440_17545) | 69553..71055 | - | 1503 | WP_205582781 | ATPase, T2SS/T4P/T4SS family | virB11 |
| ND440_RS17555 (ND440_17550) | 71057..71593 | - | 537 | WP_234049644 | type IV pilus biogenesis protein PilP | - |
| ND440_RS17560 (ND440_17555) | 71580..72845 | - | 1266 | WP_120806788 | type 4b pilus protein PilO2 | - |
| ND440_RS17565 (ND440_17560) | 72850..74490 | - | 1641 | WP_120806787 | PilN family type IVB pilus formation outer membrane protein | - |
| ND440_RS17570 (ND440_17565) | 74501..74926 | - | 426 | WP_265317732 | type IV pilus biogenesis protein PilM | - |
| ND440_RS17575 (ND440_17570) | 74923..75930 | - | 1008 | WP_120806785 | TcpQ domain-containing protein | - |