T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 12536..22861
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NDJ97_RS22900 (NDJ97_22895) | 8381..9814 | - | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |
| NDJ97_RS22905 (NDJ97_22900) | 9913..10185 | + | 273 | Protein_12 | IS1 family transposase | - |
| NDJ97_RS22910 (NDJ97_22905) | 10196..10402 | - | 207 | WP_001749967 | hypothetical protein | - |
| NDJ97_RS22915 (NDJ97_22910) | 10407..11054 | - | 648 | WP_015344958 | restriction endonuclease | - |
| NDJ97_RS22920 (NDJ97_22915) | 11104..11415 | - | 312 | WP_001452736 | hypothetical protein | - |
| NDJ97_RS22925 (NDJ97_22920) | 11451..11765 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| NDJ97_RS22930 (NDJ97_22925) | 11762..12106 | - | 345 | WP_001749964 | hypothetical protein | - |
| NDJ97_RS22935 (NDJ97_22930) | 12122..12493 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| NDJ97_RS22940 (NDJ97_22935) | 12536..13270 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| NDJ97_RS22945 (NDJ97_22940) | 13279..13560 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| NDJ97_RS22950 (NDJ97_22945) | 13570..13863 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| NDJ97_RS22955 (NDJ97_22950) | 13913..14230 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| NDJ97_RS22960 (NDJ97_22955) | 14362..16830 | + | 2469 | WP_224743086 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| NDJ97_RS22965 (NDJ97_22960) | 16848..17561 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| NDJ97_RS22970 (NDJ97_22965) | 17569..17796 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| NDJ97_RS22975 (NDJ97_22970) | 17812..18852 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| NDJ97_RS23260 | 18953..19081 | + | 129 | WP_071882546 | conjugal transfer protein TraN | - |
| NDJ97_RS22980 (NDJ97_22975) | 19071..19769 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| NDJ97_RS22985 (NDJ97_22980) | 19780..20664 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| NDJ97_RS22990 (NDJ97_22985) | 20664..21824 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| NDJ97_RS22995 (NDJ97_22990) | 21866..22861 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| NDJ97_RS23000 (NDJ97_22995) | 22861..23394 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| NDJ97_RS23265 | 23568..23855 | - | 288 | Protein_33 | DUF6710 family protein | - |
| NDJ97_RS23010 (NDJ97_23005) | 24122..24301 | + | 180 | Protein_34 | helix-turn-helix domain-containing protein | - |
| NDJ97_RS23015 (NDJ97_23010) | 24366..25070 | + | 705 | WP_001067855 | IS6-like element IS26 family transposase | - |
| NDJ97_RS23020 (NDJ97_23015) | 25124..25755 | - | 632 | Protein_36 | transposase | - |
| NDJ97_RS23025 (NDJ97_23020) | 26150..26806 | + | 657 | WP_001516695 | quinolone resistance pentapeptide repeat protein QnrS1 | - |
| NDJ97_RS23030 (NDJ97_23025) | 27125..27739 | - | 615 | WP_014839983 | recombinase family protein | - |