T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 54646..81048
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTC35_RS00255 (D616_p117041) | 54012..54239 | + | 228 | WP_000450532 | toxin-antitoxin system antitoxin VapB | - |
| HTC35_RS00260 (D616_p117042) | 54239..54637 | + | 399 | WP_000911324 | type II toxin-antitoxin system VapC family toxin | - |
| HTC35_RS00265 (D616_p117043) | 54646..56799 | - | 2154 | WP_000009350 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HTC35_RS00270 (D616_p117044) | 57052..57783 | - | 732 | WP_000850422 | conjugal transfer complement resistance protein TraT | - |
| HTC35_RS00275 | 57808..58329 | - | 522 | WP_000632670 | conjugal transfer entry exclusion protein TraS | - |
| HTC35_RS00280 (D616_p117046) | 58362..61178 | - | 2817 | WP_001007054 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HTC35_RS00285 (D616_p117047) | 61175..62548 | - | 1374 | WP_021553026 | conjugal transfer pilus assembly protein TraH | traH |
| HTC35_RS00290 | 62535..62929 | - | 395 | Protein_59 | F-type conjugal transfer protein TrbF | - |
| HTC35_RS00295 (D616_p117049) | 62916..63257 | - | 342 | WP_001443031 | P-type conjugative transfer protein TrbJ | - |
| HTC35_RS00300 (D616_p117050) | 63187..63732 | - | 546 | WP_000059850 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HTC35_RS00305 (D616_p117051) | 63719..64003 | - | 285 | WP_000624109 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HTC35_RS00310 | 64084..64398 | + | 315 | WP_000415567 | hypothetical protein | - |
| HTC35_RS00315 | 64400..64747 | - | 348 | WP_001287913 | conjugal transfer protein TrbA | - |
| HTC35_RS00320 (D616_p117052) | 64763..65506 | - | 744 | WP_001030367 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HTC35_RS00325 | 65499..65756 | - | 258 | WP_000864318 | conjugal transfer protein TrbE | - |
| HTC35_RS00330 (D616_p117053) | 65783..67591 | - | 1809 | WP_000821847 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HTC35_RS00335 (D616_p117054) | 67588..68226 | - | 639 | WP_000777688 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HTC35_RS00340 (D616_p117055) | 68235..69227 | - | 993 | WP_000830187 | conjugal transfer pilus assembly protein TraU | traU |
| HTC35_RS00345 (D616_p117056) | 69224..69856 | - | 633 | WP_001203720 | type-F conjugative transfer system protein TraW | traW |
| HTC35_RS00350 (D616_p117057) | 69853..70239 | - | 387 | WP_000097319 | type-F conjugative transfer system protein TrbI | - |
| HTC35_RS00355 (D616_p117058) | 70236..72863 | - | 2628 | WP_001064247 | type IV secretion system protein TraC | virb4 |
| HTC35_RS00360 (D616_p117059) | 73023..73244 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| HTC35_RS00365 (D616_p117060) | 73379..73894 | - | 516 | WP_000809841 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTC35_RS00370 (D616_p117061) | 73891..74142 | - | 252 | WP_001038342 | conjugal transfer protein TrbG | - |
| HTC35_RS00375 (D616_p117062) | 74154..74345 | - | 192 | WP_032072783 | conjugal transfer protein TrbD | - |
| HTC35_RS00380 (D616_p117063) | 74338..74928 | - | 591 | WP_000002792 | conjugal transfer pilus-stabilizing protein TraP | - |
| HTC35_RS00385 (D616_p117064) | 74918..76345 | - | 1428 | WP_000146692 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HTC35_RS00390 (D616_p117065) | 76345..77073 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| HTC35_RS00395 (D616_p117066) | 77060..77626 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| HTC35_RS00400 (D616_p117067) | 77648..77959 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| HTC35_RS00405 (D616_p117068) | 77974..78339 | - | 366 | WP_000994779 | type IV conjugative transfer system pilin TraA | - |
| HTC35_RS00410 | 78372..78773 | - | 402 | WP_001369361 | conjugal transfer relaxosome DNA-bindin protein TraY | - |
| HTC35_RS00415 (D616_p117070) | 78866..79555 | - | 690 | WP_000283385 | conjugal transfer transcriptional regulator TraJ | - |
| HTC35_RS00420 (D616_p117071) | 79742..80125 | - | 384 | WP_001151524 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HTC35_RS00425 (D616_p117072) | 80446..81048 | + | 603 | WP_000243709 | transglycosylase SLT domain-containing protein | virB1 |
| HTC35_RS00430 | 81344..82165 | - | 822 | WP_001234469 | DUF932 domain-containing protein | - |
| HTC35_RS00435 (D616_p117073) | 82286..82573 | - | 288 | WP_000107535 | hypothetical protein | - |
| HTC35_RS00440 | 82598..82804 | - | 207 | WP_000547939 | hypothetical protein | - |
| HTC35_RS00530 | 82874..83047 | + | 174 | Protein_90 | hypothetical protein | - |
| HTC35_RS00535 | 83045..83275 | - | 231 | WP_001426396 | hypothetical protein | - |
| HTC35_RS00445 | 83495..83620 | - | 126 | WP_001372321 | type I toxin-antitoxin system Hok family toxin | - |
| HTC35_RS00540 | 83562..83711 | - | 150 | Protein_93 | plasmid maintenance protein Mok | - |
| HTC35_RS00450 (D616_p117075) | 83890..84652 | - | 763 | Protein_94 | plasmid SOS inhibition protein A | - |
| HTC35_RS00455 (D616_p117076) | 84649..85083 | - | 435 | WP_000845895 | conjugation system SOS inhibitor PsiB | - |