T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 819..10026
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LA316_RS22495 (LA316_22495) | 819..3500 | - | 2682 | WP_000387412 | TraC family protein | virb4 |
| LA316_RS22500 (LA316_22500) | 3509..4459 | - | 951 | WP_001022588 | IncHI-type conjugal transfer lipoprotein TrhV | traV |
| LA316_RS22505 (LA316_22505) | 4469..5221 | - | 753 | WP_182911723 | protein-disulfide isomerase HtdT | - |
| LA316_RS22510 (LA316_22510) | 5340..5822 | - | 483 | WP_000377632 | hypothetical protein | - |
| LA316_RS22515 (LA316_22515) | 5830..7185 | - | 1356 | WP_000351841 | IncHI-type conjugal transfer protein TrhB | traB |
| LA316_RS22520 (LA316_22520) | 7175..7636 | - | 462 | WP_000521242 | plasmid transfer protein HtdO | - |
| LA316_RS22525 (LA316_22525) | 7638..8909 | - | 1272 | WP_000592092 | type-F conjugative transfer system secretin TraK | traK |
| LA316_RS22530 (LA316_22530) | 8909..9697 | - | 789 | WP_000783153 | TraE/TraK family type IV conjugative transfer system protein | traE |
| LA316_RS22535 (LA316_22535) | 9709..10059 | - | 351 | WP_001447770 | type IV conjugative transfer system protein TraL | - |
| LA316_RS22540 (LA316_22540) | 10077..10430 | - | 354 | WP_000423602 | hypothetical protein | - |
| LA316_RS22545 (LA316_22545) | 11579..12454 | - | 876 | WP_000594611 | RepB family plasmid replication initiator protein | - |
| LA316_RS22550 (LA316_22550) | 12931..13983 | + | 1053 | WP_001065778 | hypothetical protein | - |
| LA316_RS22555 (LA316_22555) | 14003..14203 | + | 201 | WP_000594930 | hypothetical protein | - |
| LA316_RS22560 (LA316_22560) | 14200..14916 | + | 717 | WP_000838219 | zinc finger-like domain-containing protein | - |