T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3..8817
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IUD25_RS11250 (IUD25_11250) | 3..323 | + | 321 | WP_004086725 | conjugal transfer protein TrbD | virB3 |
| IUD25_RS11255 (IUD25_11255) | 311..2875 | + | 2565 | WP_004086690 | conjugal transfer protein TrbE | virb4 |
| IUD25_RS11260 (IUD25_11260) | 2872..3588 | + | 717 | WP_004086692 | conjugal transfer protein TrbF | virB8 |
| IUD25_RS11265 (IUD25_11265) | 3605..4495 | + | 891 | WP_004086695 | P-type conjugative transfer protein TrbG | virB9 |
| IUD25_RS11270 (IUD25_11270) | 4498..4974 | + | 477 | WP_004086697 | conjugal transfer protein TrbH | - |
| IUD25_RS11275 (IUD25_11275) | 4980..6380 | + | 1401 | WP_012382833 | TrbI/VirB10 family protein | virB10 |
| IUD25_RS11280 (IUD25_11280) | 6399..7172 | + | 774 | WP_004086702 | P-type conjugative transfer protein TrbJ | virB5 |
| IUD25_RS11285 (IUD25_11285) | 7189..7425 | + | 237 | WP_012382834 | EexN family lipoprotein | - |
| IUD25_RS11290 (IUD25_11290) | 7447..8817 | + | 1371 | WP_004086703 | P-type conjugative transfer protein TrbL | virB6 |
| IUD25_RS11295 (IUD25_11295) | 8823..9422 | + | 600 | WP_004086719 | conjugal transfer protein TrbN | - |
| IUD25_RS11300 (IUD25_11300) | 10035..10262 | - | 228 | WP_004086706 | hypothetical protein | - |
| IUD25_RS11305 (IUD25_11305) | 10259..10627 | - | 369 | WP_004086708 | hypothetical protein | - |
| IUD25_RS11310 (IUD25_11310) | 11170..11733 | + | 564 | WP_004086710 | recombinase family protein | - |
| IUD25_RS11315 (IUD25_11315) | 12064..12657 | + | 594 | WP_004086726 | LPD29 domain-containing protein | - |
| IUD25_RS11320 (IUD25_11320) | 12725..13039 | + | 315 | WP_012382835 | TrfB-related DNA-binding protein | - |
| IUD25_RS11325 (IUD25_11325) | 13216..13809 | + | 594 | WP_004086728 | LPD29 domain-containing protein | - |