T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 2340..12664
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HS667_RS00005 | 1..207 | - | 207 | WP_001749967 | hypothetical protein | - |
| HS667_RS00010 (pNL194_p01) | 212..859 | - | 648 | WP_015344958 | restriction endonuclease | - |
| HS667_RS00015 | 909..1142 | - | 234 | WP_001191790 | hypothetical protein | - |
| HS667_RS00020 (pNL194_p02) | 1256..1570 | - | 315 | WP_000734776 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| HS667_RS00025 | 1533..1910 | - | 378 | WP_010999955 | hypothetical protein | - |
| HS667_RS00030 (pNL194_p03) | 1926..2297 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| HS667_RS00035 (pNL194_p04) | 2340..3074 | + | 735 | WP_000033783 | lytic transglycosylase domain-containing protein | virB1 |
| HS667_RS00040 (pNL194_p05) | 3083..3364 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| HS667_RS00045 (pNL194_p06) | 3374..3667 | + | 294 | WP_000209137 | TrbC/VirB2 family protein | virB2 |
| HS667_RS00050 (pNL194_p07) | 3717..4028 | + | 312 | WP_010999956 | VirB3 family type IV secretion system protein | virB3 |
| HS667_RS00055 (pNL194_p08) | 4033..6633 | + | 2601 | WP_010999957 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| HS667_RS00060 (pNL194_p09) | 6651..7364 | + | 714 | WP_013263778 | type IV secretion system protein | virB5 |
| HS667_RS00065 (pNL194_p10) | 7372..7602 | + | 231 | WP_013263779 | IncN-type entry exclusion lipoprotein EexN | - |
| HS667_RS00070 (pNL194_p11) | 7618..8658 | + | 1041 | WP_013263780 | type IV secretion system protein | virB6 |
| HS667_RS00075 (pNL194_p13) | 8877..9575 | + | 699 | WP_010999962 | type IV secretion system protein | virB8 |
| HS667_RS00080 (pNL194_p14) | 9586..10470 | + | 885 | WP_010999963 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| HS667_RS00085 (pNL194_p15) | 10470..11630 | + | 1161 | WP_010999964 | type IV secretion system protein VirB10 | virB10 |
| HS667_RS00090 (pNL194_p16) | 11669..12664 | + | 996 | WP_010999965 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HS667_RS00095 (pNL194_p17) | 12664..13197 | + | 534 | WP_013263781 | phospholipase D family protein | - |
| HS667_RS00100 | 13327..13687 | - | 361 | Protein_19 | hypothetical protein | - |
| HS667_RS00105 (pNL194_p19) | 13944..14300 | - | 357 | WP_000215515 | cupin domain-containing protein | - |
| HS667_RS00110 (pNL194_p20) | 14290..14691 | - | 402 | WP_001293886 | DUF86 domain-containing protein | - |
| HS667_RS00115 (pNL194_p21) | 14688..14978 | - | 291 | WP_001247892 | nucleotidyltransferase | - |
| HS667_RS00120 (pNL194_p22) | 15285..15872 | - | 588 | Protein_23 | class 1 integron integrase IntI1 | - |
| HS667_RS00125 | 15875..15940 | + | 66 | Protein_24 | EAL domain-containing protein | - |
| HS667_RS00130 (pNL194_p23) | 16080..16844 | - | 765 | WP_001389365 | IS6-like element IS6100 family transposase | - |
| HS667_RS00135 | 16962..17027 | - | 66 | Protein_26 | EAL domain-containing protein | - |
| HS667_RS00140 (pNL194_p24) | 17071..17376 | - | 306 | WP_000130000 | PadR family transcriptional regulator | - |