T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 18767..58014
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| COO90_RS26255 (COO90_26055) | 13829..14896 | + | 1068 | WP_012783947 | type IV pilus biogenesis lipoprotein PilL | - |
| COO90_RS26260 (COO90_26060) | 14896..15333 | + | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| COO90_RS26265 (COO90_26065) | 15347..17029 | + | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| COO90_RS26270 (COO90_26070) | 17022..18317 | + | 1296 | WP_001388364 | type 4b pilus protein PilO2 | - |
| COO90_RS26275 (COO90_26075) | 18304..18756 | + | 453 | WP_001247870 | type IV pilus biogenesis protein PilP | - |
| COO90_RS26280 (COO90_26080) | 18767..20320 | + | 1554 | WP_001492932 | ATPase, T2SS/T4P/T4SS family | virB11 |
| COO90_RS26285 (COO90_26085) | 20333..21430 | + | 1098 | WP_001492931 | type II secretion system F family protein | - |
| COO90_RS26290 (COO90_26090) | 21448..22062 | + | 615 | WP_001542527 | type 4 pilus major pilin | - |
| COO90_RS26295 (COO90_26095) | 22072..22632 | + | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| COO90_RS26300 (COO90_26100) | 22617..23273 | + | 657 | WP_001193553 | prepilin peptidase | - |
| COO90_RS26305 (COO90_26105) | 23273..24563 | + | 1291 | Protein_26 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| COO90_RS26310 (COO90_26110) | 25513..25686 | - | 174 | WP_254103232 | hypothetical protein | - |
| COO90_RS26315 (COO90_26115) | 25798..26951 | + | 1154 | Protein_28 | site-specific integrase | - |
| COO90_RS26320 (COO90_26120) | 27102..27926 | + | 825 | WP_001238932 | conjugal transfer protein TraE | traE |
| COO90_RS26325 (COO90_26125) | 28012..29214 | + | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| COO90_RS26330 (COO90_26130) | 29274..29858 | + | 585 | WP_000977522 | histidine phosphatase family protein | - |
| COO90_RS26335 (COO90_26135) | 30252..30710 | + | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| COO90_RS26340 (COO90_26140) | 30707..31525 | + | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| COO90_RS26345 (COO90_26145) | 31522..32670 | + | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| COO90_RS26350 (COO90_26150) | 32667..32957 | + | 291 | WP_001299214 | hypothetical protein | traK |
| COO90_RS26355 (COO90_26155) | 32972..33523 | + | 552 | WP_000014583 | phospholipase D family protein | - |
| COO90_RS26360 (COO90_26160) | 33613..37380 | + | 3768 | WP_001141527 | LPD7 domain-containing protein | - |
| COO90_RS26365 (COO90_26165) | 37398..37745 | + | 348 | WP_001055900 | conjugal transfer protein | traL |
| COO90_RS26370 (COO90_26170) | 37742..38434 | + | 693 | WP_000138550 | DotI/IcmL family type IV secretion protein | traM |
| COO90_RS26375 (COO90_26175) | 38445..39428 | + | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| COO90_RS26380 (COO90_26180) | 39431..40720 | + | 1290 | WP_042004726 | conjugal transfer protein TraO | traO |
| COO90_RS26385 (COO90_26185) | 40720..41424 | + | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| COO90_RS26390 (COO90_26190) | 41424..41951 | + | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| COO90_RS26395 (COO90_26195) | 42002..42406 | + | 405 | WP_000086965 | IncI1-type conjugal transfer protein TraR | traR |
| COO90_RS26400 (COO90_26200) | 42470..42658 | + | 189 | WP_001277253 | putative conjugal transfer protein TraS | - |
| COO90_RS26405 (COO90_26205) | 42642..43442 | + | 801 | WP_001164784 | IncI1-type conjugal transfer protein TraT | traT |
| COO90_RS26410 (COO90_26210) | 43532..46576 | + | 3045 | WP_001024789 | IncI1-type conjugal transfer protein TraU | traU |
| COO90_RS26415 (COO90_26215) | 46576..47190 | + | 615 | WP_000337399 | IncI1-type conjugal transfer protein TraV | traV |
| COO90_RS26420 (COO90_26220) | 47157..48359 | + | 1203 | WP_042004725 | IncI1-type conjugal transfer protein TraW | traW |
| COO90_RS26425 (COO90_26225) | 48388..48972 | + | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| COO90_RS26430 (COO90_26230) | 49069..51237 | + | 2169 | WP_000698357 | DotA/TraY family protein | traY |
| COO90_RS26435 (COO90_26235) | 51311..51961 | + | 651 | WP_001178506 | plasmid IncI1-type surface exclusion protein ExcA | - |
| COO90_RS26440 (COO90_26240) | 52033..52242 | - | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| COO90_RS26445 (COO90_26245) | 52634..52810 | + | 177 | WP_001054898 | hypothetical protein | - |
| COO90_RS27490 | 52875..52970 | - | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| COO90_RS26455 (COO90_26250) | 53469..53720 | + | 252 | WP_001291964 | hypothetical protein | - |
| COO90_RS26460 (COO90_26255) | 53792..53944 | - | 153 | WP_001331364 | Hok/Gef family protein | - |
| COO90_RS26465 (COO90_26260) | 54513..55499 | + | 987 | WP_001257838 | hypothetical protein | - |
| COO90_RS26470 (COO90_26265) | 55717..56925 | + | 1209 | WP_001383960 | IncI1-type conjugal transfer protein TrbA | trbA |
| COO90_RS26475 (COO90_26270) | 56944..58014 | + | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| COO90_RS26480 (COO90_26275) | 58007..60298 | + | 2292 | WP_021520372 | F-type conjugative transfer protein TrbC | - |