T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 46751..71894
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTC06_RS00335 | 42782..43015 | - | 234 | WP_001191890 | hypothetical protein | - |
| HTC06_RS00340 | 42997..43614 | - | 618 | WP_001249395 | hypothetical protein | - |
| HTC06_RS00345 (D647_p42047) | 43782..46754 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| HTC06_RS00350 (D647_p42048) | 46751..48616 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HTC06_RS00355 (D647_p42049) | 48627..49211 | + | 585 | WP_000332868 | hypothetical protein | - |
| HTC06_RS00360 (D647_p42050) | 49168..49797 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HTC06_RS00365 (D647_p42051) | 49807..50253 | + | 447 | WP_000122507 | hypothetical protein | - |
| HTC06_RS00370 (D647_p42052) | 50263..50640 | + | 378 | WP_000869297 | hypothetical protein | - |
| HTC06_RS00375 (D647_p42053) | 50640..51302 | + | 663 | WP_001231464 | hypothetical protein | - |
| HTC06_RS00380 (D647_p42054) | 51483..51626 | + | 144 | WP_001275801 | hypothetical protein | - |
| HTC06_RS00385 (D647_p42055) | 51638..52003 | + | 366 | WP_001052530 | hypothetical protein | - |
| HTC06_RS00390 (D647_p42056) | 52148..52429 | + | 282 | WP_024269730 | type IV conjugative transfer system protein TraL | traL |
| HTC06_RS00395 | 52426..53052 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HTC06_RS00400 (D647_p42058) | 53036..53953 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HTC06_RS00405 (D647_p42059) | 53953..55266 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HTC06_RS00410 (D647_p42060) | 55263..55841 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTC06_RS00415 (D647_p42061) | 55845..56237 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HTC06_RS00420 (D647_p42062) | 56438..61924 | + | 5487 | WP_000606835 | Ig-like domain-containing protein | - |
| HTC06_RS00425 | 62073..62780 | + | 708 | WP_001259346 | DsbC family protein | - |
| HTC06_RS00430 (D647_p42063) | 62777..65224 | + | 2448 | WP_000637384 | type IV secretion system protein TraC | virb4 |
| HTC06_RS00435 (D647_p42064) | 65239..65556 | + | 318 | WP_000351984 | hypothetical protein | - |
| HTC06_RS00440 (D647_p42065) | 65553..66083 | + | 531 | WP_001010740 | S26 family signal peptidase | - |
| HTC06_RS00445 (D647_p42066) | 66046..67311 | + | 1266 | WP_001447719 | TrbC family F-type conjugative pilus assembly protein | traW |
| HTC06_RS00450 (D647_p42067) | 67308..67979 | + | 672 | WP_000575345 | EAL domain-containing protein | - |
| HTC06_RS00455 (D647_p42068) | 67979..68983 | + | 1005 | WP_005507569 | TraU family protein | traU |
| HTC06_RS00460 (D647_p42069) | 69099..71894 | + | 2796 | WP_001256484 | conjugal transfer mating pair stabilization protein TraN | traN |
| HTC06_RS00465 (D647_p42070) | 71933..72793 | - | 861 | WP_000709517 | hypothetical protein | - |
| HTC06_RS00470 (D647_p42071) | 72916..73557 | - | 642 | WP_000796664 | hypothetical protein | - |
| HTC06_RS00475 | 73852..74172 | + | 321 | WP_000547566 | hypothetical protein | - |
| HTC06_RS00480 (D647_p42073) | 74476..74661 | + | 186 | WP_001186917 | hypothetical protein | - |
| HTC06_RS00485 (D647_p42074) | 74881..75849 | + | 969 | WP_000085160 | AAA family ATPase | - |
| HTC06_RS00490 (D647_p42075) | 75860..76768 | + | 909 | WP_000739139 | hypothetical protein | - |