T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3654..14199
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DF208_RS24420 (DF208_24400) | 1..876 | + | 876 | WP_000594611 | RepB family plasmid replication initiator protein | - |
| DF208_RS24435 (DF208_24415) | 3250..3603 | + | 354 | WP_000423602 | hypothetical protein | - |
| DF208_RS24440 (DF208_24420) | 3621..3971 | + | 351 | WP_001447770 | type IV conjugative transfer system protein TraL | - |
| DF208_RS24445 (DF208_24425) | 3983..4771 | + | 789 | WP_000783153 | TraE/TraK family type IV conjugative transfer system protein | traE |
| DF208_RS24450 (DF208_24430) | 4771..6042 | + | 1272 | WP_115877100 | type-F conjugative transfer system secretin TraK | traK |
| DF208_RS24460 (DF208_24440) | 6180..7388 | + | 1209 | WP_001339197 | IS4-like element ISVsa5 family transposase | - |
| DF208_RS27100 (DF208_24445) | 7385..7843 | + | 459 | WP_275592999 | plasmid transfer protein HtdO | - |
| DF208_RS24470 (DF208_24450) | 7833..9188 | + | 1356 | WP_000351841 | IncHI-type conjugal transfer protein TrhB | traB |
| DF208_RS24475 (DF208_24455) | 9196..9678 | + | 483 | WP_000377632 | hypothetical protein | - |
| DF208_RS24480 (DF208_24460) | 9797..10549 | + | 753 | WP_182911723 | protein-disulfide isomerase HtdT | - |
| DF208_RS24485 (DF208_24465) | 10559..11509 | + | 951 | WP_001022588 | IncHI-type conjugal transfer lipoprotein TrhV | traV |
| DF208_RS24490 (DF208_24470) | 11518..14199 | + | 2682 | WP_000387412 | TraC family protein | virb4 |
| DF208_RS26665 | 16748..16909 | + | 162 | WP_001371949 | hypothetical protein | - |