T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 46429..82878
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DPF84_RS26075 (DPF84_26070) | 41685..42461 | + | 777 | WP_094935554 | hypothetical protein | - |
| DPF84_RS26080 (DPF84_26075) | 42492..42761 | - | 270 | WP_048227650 | hypothetical protein | - |
| DPF84_RS26085 (DPF84_26080) | 42834..45134 | - | 2301 | WP_053389033 | F-type conjugative transfer protein TrbC | - |
| DPF84_RS26090 (DPF84_26085) | 45243..46373 | + | 1131 | WP_053389034 | RNA-guided endonuclease TnpB family protein | - |
| DPF84_RS26095 (DPF84_26090) | 46429..47628 | - | 1200 | WP_053389035 | thioredoxin fold domain-containing protein | trbB |
| DPF84_RS26100 (DPF84_26095) | 47681..48889 | - | 1209 | WP_053389036 | hypothetical protein | trbA |
| DPF84_RS26105 (DPF84_26100) | 49192..49824 | - | 633 | WP_053069310 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DPF84_RS26110 (DPF84_26105) | 49886..52048 | - | 2163 | WP_053389037 | DotA/TraY family protein | traY |
| DPF84_RS26115 (DPF84_26110) | 52105..52647 | - | 543 | WP_094935555 | conjugal transfer protein TraX | - |
| DPF84_RS26120 (DPF84_26115) | 52644..53846 | - | 1203 | WP_048227644 | conjugal transfer protein TraW | traW |
| DPF84_RS26125 (DPF84_26120) | 54428..57481 | - | 3054 | WP_053389039 | conjugal transfer protein | traU |
| DPF84_RS26130 (DPF84_26125) | 57553..58422 | - | 870 | WP_232926360 | conjugal transfer protein TraT | traT |
| DPF84_RS26135 (DPF84_26130) | 58468..58872 | - | 405 | WP_048227642 | DUF6750 family protein | traR |
| DPF84_RS26140 (DPF84_26135) | 58907..59431 | - | 525 | WP_048227641 | conjugal transfer protein TraQ | traQ |
| DPF84_RS26145 (DPF84_26140) | 59431..60204 | - | 774 | WP_129719564 | conjugal transfer protein TraP | traP |
| DPF84_RS26150 (DPF84_26145) | 60185..61501 | - | 1317 | WP_053389040 | conjugal transfer protein TraO | traO |
| DPF84_RS26155 (DPF84_26150) | 61501..62484 | - | 984 | WP_053389041 | DotH/IcmK family type IV secretion protein | traN |
| DPF84_RS26160 (DPF84_26155) | 62495..63112 | - | 618 | WP_227525330 | DotI/IcmL/TraM family protein | traM |
| DPF84_RS26165 (DPF84_26160) | 63202..63552 | - | 351 | WP_053389043 | hypothetical protein | traL |
| DPF84_RS28900 (DPF84_26165) | 64842..68057 | - | 3216 | Protein_71 | LPD7 domain-containing protein | - |
| DPF84_RS26175 (DPF84_26170) | 68129..68416 | - | 288 | WP_048227635 | hypothetical protein | traK |
| DPF84_RS26180 (DPF84_26175) | 68413..69573 | - | 1161 | WP_053389045 | plasmid transfer ATPase TraJ | virB11 |
| DPF84_RS26185 (DPF84_26180) | 69585..70391 | - | 807 | WP_053389046 | type IV secretory system conjugative DNA transfer family protein | traI |
| DPF84_RS26190 (DPF84_26185) | 70388..70861 | - | 474 | WP_053389047 | DotD/TraH family lipoprotein | - |
| DPF84_RS26195 (DPF84_26190) | 70994..72202 | - | 1209 | WP_053389048 | conjugal transfer protein TraF | - |
| DPF84_RS26200 (DPF84_26195) | 72305..73141 | - | 837 | WP_053389049 | hypothetical protein | traE |
| DPF84_RS28165 | 73287..73763 | - | 477 | WP_127341066 | hypothetical protein | - |
| DPF84_RS26205 (DPF84_26200) | 73783..74943 | - | 1161 | WP_053389050 | site-specific integrase | - |
| DPF84_RS26210 (DPF84_26205) | 75000..75380 | + | 381 | Protein_80 | phage tail protein | - |
| DPF84_RS26225 (DPF84_26220) | 76534..77040 | - | 507 | WP_077223963 | sugar O-acetyltransferase | - |
| DPF84_RS26230 (DPF84_26225) | 77095..78381 | - | 1287 | WP_058687259 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| DPF84_RS26235 (DPF84_26230) | 78378..79052 | - | 675 | WP_053389052 | prepilin peptidase | - |
| DPF84_RS26240 (DPF84_26235) | 79037..79519 | - | 483 | WP_069325157 | lytic transglycosylase domain-containing protein | virB1 |
| DPF84_RS26245 (DPF84_26240) | 79604..80218 | - | 615 | WP_052463753 | type 4 pilus major pilin | - |
| DPF84_RS26250 (DPF84_26245) | 80232..81326 | - | 1095 | WP_040231337 | type II secretion system F family protein | - |
| DPF84_RS26255 (DPF84_26250) | 81319..82878 | - | 1560 | WP_053389053 | ATPase, T2SS/T4P/T4SS family | virB11 |
| DPF84_RS26260 (DPF84_26255) | 82881..83381 | - | 501 | WP_053069306 | type IV pilus biogenesis protein PilP | - |
| DPF84_RS26265 (DPF84_26260) | 83365..84669 | - | 1305 | WP_048227626 | type 4b pilus protein PilO2 | - |
| DPF84_RS26270 (DPF84_26265) | 84671..86347 | - | 1677 | WP_048227625 | PilN family type IVB pilus formation outer membrane protein | - |
| DPF84_RS26275 (DPF84_26270) | 86362..86802 | - | 441 | WP_224773767 | type IV pilus biogenesis protein PilM | - |