T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 11816..52380
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CH310_RS24730 (CH310_26585) | 7884..8297 | + | 414 | WP_124983997 | type IV pilus biogenesis protein PilM | - |
| CH310_RS24735 (CH310_26590) | 8329..9948 | + | 1620 | WP_001035562 | PilN family type IVB pilus formation outer membrane protein | - |
| CH310_RS24740 (CH310_26595) | 9969..11264 | + | 1296 | WP_000129883 | type 4b pilus protein PilO2 | - |
| CH310_RS24745 (CH310_26600) | 11254..11712 | + | 459 | WP_000095885 | type IV pilus biogenesis protein PilP | - |
| CH310_RS24750 (CH310_26605) | 11816..13324 | + | 1509 | WP_000880805 | ATPase, T2SS/T4P/T4SS family | virB11 |
| CH310_RS24755 (CH310_26610) | 13326..14420 | + | 1095 | WP_000697158 | type II secretion system F family protein | - |
| CH310_RS24760 (CH310_26615) | 14482..15018 | + | 537 | WP_000111534 | type 4 pilus major pilin | - |
| CH310_RS24765 (CH310_26620) | 15063..15548 | + | 486 | WP_001080767 | lytic transglycosylase domain-containing protein | virB1 |
| CH310_RS24770 (CH310_26625) | 15564..16190 | + | 627 | WP_000939245 | prepilin peptidase | - |
| CH310_RS24775 (CH310_26630) | 16208..17569 | + | 1362 | WP_001168171 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| CH310_RS26275 (CH310_26635) | 17683..17877 | + | 195 | Protein_18 | integrase | - |
| CH310_RS24785 (CH310_26640) | 18042..18863 | + | 822 | WP_000845373 | hypothetical protein | traE |
| CH310_RS24790 (CH310_26645) | 18965..20167 | + | 1203 | WP_000979993 | conjugal transfer protein TraF | - |
| CH310_RS24795 (CH310_26650) | 20271..20729 | + | 459 | WP_001170111 | DotD/TraH family lipoprotein | - |
| CH310_RS24800 (CH310_26655) | 20726..21562 | + | 837 | WP_000745049 | type IV secretory system conjugative DNA transfer family protein | traI |
| CH310_RS24805 (CH310_26660) | 21546..22694 | + | 1149 | WP_000775210 | plasmid transfer ATPase TraJ | virB11 |
| CH310_RS24810 (CH310_26665) | 22691..22981 | + | 291 | WP_000817801 | IcmT/TraK family protein | traK |
| CH310_RS24815 (CH310_26670) | 23045..27106 | + | 4062 | WP_000842456 | LPD7 domain-containing protein | - |
| CH310_RS24820 (CH310_26675) | 27123..27473 | + | 351 | WP_001056367 | hypothetical protein | traL |
| CH310_RS24825 (CH310_26680) | 27485..28180 | + | 696 | WP_001287545 | DotI/IcmL family type IV secretion protein | traM |
| CH310_RS24830 (CH310_26685) | 28191..29165 | + | 975 | WP_000547386 | DotH/IcmK family type IV secretion protein | traN |
| CH310_RS24835 (CH310_26690) | 29169..30506 | + | 1338 | WP_001272020 | conjugal transfer protein TraO | traO |
| CH310_RS24840 (CH310_26695) | 30503..31216 | + | 714 | WP_000787002 | conjugal transfer protein TraP | traP |
| CH310_RS24845 (CH310_26700) | 31213..31743 | + | 531 | WP_000987021 | conjugal transfer protein TraQ | traQ |
| CH310_RS24850 (CH310_26705) | 31790..32188 | + | 399 | WP_000088813 | DUF6750 family protein | traR |
| CH310_RS26405 (CH310_26710) | 32212..32496 | + | 285 | WP_001353683 | hypothetical protein | - |
| CH310_RS24860 (CH310_26715) | 32603..33229 | + | 627 | WP_000785703 | hypothetical protein | traT |
| CH310_RS24870 (CH310_26725) | 33524..36568 | + | 3045 | WP_001024769 | conjugal transfer protein | traU |
| CH310_RS24875 (CH310_26730) | 36568..37188 | + | 621 | WP_000286855 | hypothetical protein | traV |
| CH310_RS24880 (CH310_26735) | 37146..38351 | + | 1206 | WP_001189548 | conjugal transfer protein TraW | traW |
| CH310_RS24885 (CH310_26740) | 38348..38917 | + | 570 | WP_000650752 | conjugal transfer protein TraX | - |
| CH310_RS24890 (CH310_26745) | 38992..41151 | + | 2160 | WP_000691811 | DotA/TraY family protein | traY |
| CH310_RS24895 (CH310_26750) | 41239..41886 | + | 648 | WP_015056434 | plasmid IncI1-type surface exclusion protein ExcA | - |
| CH310_RS24900 (CH310_26755) | 42160..43746 | + | 1587 | WP_000004564 | TnsA endonuclease N-terminal domain-containing protein | - |
| CH310_RS24905 (CH310_26760) | 43884..44036 | - | 153 | WP_001335079 | Hok/Gef family protein | - |
| CH310_RS24910 (CH310_26765) | 44366..44608 | + | 243 | WP_000650923 | hypothetical protein | - |
| CH310_RS24915 (CH310_26770) | 44696..44887 | + | 192 | WP_000751583 | hypothetical protein | - |
| CH310_RS24920 (CH310_26775) | 44899..45267 | + | 369 | WP_001345852 | hypothetical protein | - |
| CH310_RS24925 (CH310_26780) | 45271..45486 | + | 216 | WP_000266543 | hypothetical protein | - |
| CH310_RS24935 | 45684..46307 | - | 624 | WP_032323932 | hypothetical protein | - |
| CH310_RS24940 (CH310_26790) | 46467..46886 | + | 420 | WP_052994660 | thermonuclease family protein | - |
| CH310_RS24945 (CH310_26795) | 46937..48049 | + | 1113 | WP_001300563 | IS4-like element IS421 family transposase | - |
| CH310_RS25745 | 48433..48609 | + | 177 | WP_001054907 | hypothetical protein | - |
| CH310_RS26410 | 48672..48767 | - | 96 | WP_001388983 | DinQ-like type I toxin DqlB | - |
| CH310_RS26415 | 49356..49451 | - | 96 | WP_001388983 | DinQ-like type I toxin DqlB | - |
| CH310_RS25750 | 49504..49650 | - | 147 | WP_001346191 | hypothetical protein | - |
| CH310_RS24965 (CH310_26805) | 49988..51259 | + | 1272 | WP_042842220 | IncI1-type conjugal transfer protein TrbA | trbA |
| CH310_RS24970 (CH310_26810) | 51256..52380 | + | 1125 | WP_000152378 | DsbC family protein | trbB |
| CH310_RS24975 (CH310_26815) | 52361..54664 | + | 2304 | WP_052994818 | F-type conjugative transfer protein TrbC | - |
| CH310_RS24995 (CH310_26835) | 55528..56343 | + | 816 | WP_001043260 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| CH310_RS25000 (CH310_26840) | 56430..56672 | + | 243 | Protein_58 | phosphoglucosamine mutase | - |