T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 3970..38414
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LI65_RS00360 (LI65_01030) | 34..471 | + | 438 | WP_022649971 | type IV pilus biogenesis protein PilM | - |
| LI65_RS00365 (LI65_00385) | 486..2162 | + | 1677 | WP_022649972 | PilN family type IVB pilus formation outer membrane protein | - |
| LI65_RS00370 (LI65_00390) | 2164..3468 | + | 1305 | WP_022649973 | type 4b pilus protein PilO2 | - |
| LI65_RS00375 (LI65_00395) | 3452..3967 | + | 516 | WP_022649974 | type IV pilus biogenesis protein PilP | - |
| LI65_RS00380 (LI65_00400) | 3970..5529 | + | 1560 | WP_022649975 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LI65_RS00385 (LI65_00405) | 5522..6616 | + | 1095 | WP_032623575 | type II secretion system F family protein | - |
| LI65_RS00390 (LI65_00410) | 6630..7244 | + | 615 | WP_022649977 | type 4 pilus major pilin | - |
| LI65_RS00395 (LI65_00415) | 7329..7811 | + | 483 | WP_045261878 | lytic transglycosylase domain-containing protein | virB1 |
| LI65_RS00400 (LI65_00420) | 7796..8470 | + | 675 | WP_022649979 | prepilin peptidase | - |
| LI65_RS00405 (LI65_00425) | 8467..9801 | + | 1335 | WP_032627586 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| LI65_RS00410 (LI65_00435) | 10382..11542 | + | 1161 | WP_022649981 | site-specific integrase | - |
| LI65_RS27615 | 11562..12038 | + | 477 | WP_022649982 | hypothetical protein | - |
| LI65_RS00415 | 12185..13021 | + | 837 | WP_022649983 | hypothetical protein | traE |
| LI65_RS00420 (LI65_00450) | 13127..14332 | + | 1206 | WP_022649984 | conjugal transfer protein TraF | - |
| LI65_RS27620 | 14441..14857 | + | 417 | WP_123839394 | hypothetical protein | - |
| LI65_RS00425 (LI65_00460) | 14928..15401 | + | 474 | WP_022649985 | DotD/TraH family lipoprotein | - |
| LI65_RS00430 (LI65_00465) | 15398..16204 | + | 807 | WP_022649986 | type IV secretory system conjugative DNA transfer family protein | traI |
| LI65_RS00435 (LI65_00470) | 16217..17377 | + | 1161 | WP_022649987 | plasmid transfer ATPase TraJ | virB11 |
| LI65_RS00440 (LI65_00475) | 17374..17661 | + | 288 | WP_022649988 | hypothetical protein | traK |
| LI65_RS00445 (LI65_00480) | 17733..21275 | + | 3543 | WP_032635082 | LPD7 domain-containing protein | - |
| LI65_RS00450 (LI65_00485) | 21293..21643 | + | 351 | WP_022649990 | hypothetical protein | traL |
| LI65_RS00455 (LI65_00490) | 21733..22350 | + | 618 | WP_179297403 | DotI/IcmL family type IV secretion protein | traM |
| LI65_RS00460 (LI65_00495) | 22361..23341 | + | 981 | WP_022649992 | DotH/IcmK family type IV secretion protein | traN |
| LI65_RS00465 (LI65_00500) | 23341..24648 | + | 1308 | WP_022649993 | conjugal transfer protein TraO | traO |
| LI65_RS27105 (LI65_00505) | 24632..25402 | + | 771 | WP_022649994 | conjugal transfer protein TraP | traP |
| LI65_RS00475 (LI65_00510) | 25402..25926 | + | 525 | WP_022649995 | conjugal transfer protein TraQ | traQ |
| LI65_RS00480 (LI65_00515) | 25961..26365 | + | 405 | WP_022649996 | DUF6750 family protein | traR |
| LI65_RS00485 (LI65_01040) | 26549..27274 | + | 726 | WP_063864836 | hypothetical protein | traT |
| LI65_RS00490 (LI65_00525) | 27361..30414 | + | 3054 | WP_022649998 | hypothetical protein | traU |
| LI65_RS27765 (LI65_01045) | 30414..30983 | + | 570 | WP_022649999 | hypothetical protein | traV |
| LI65_RS00500 (LI65_00535) | 30996..32198 | + | 1203 | WP_022650000 | conjugal transfer protein TraW | traW |
| LI65_RS00505 (LI65_01050) | 32195..32737 | + | 543 | WP_022650001 | conjugal transfer protein TraX | - |
| LI65_RS00510 (LI65_00545) | 32795..34954 | + | 2160 | WP_022650002 | DotA/TraY family protein | traY |
| LI65_RS00515 (LI65_00550) | 35016..35648 | + | 633 | WP_022650003 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LI65_RS00520 (LI65_00555) | 35969..37177 | + | 1209 | WP_022650004 | hypothetical protein | trbA |
| LI65_RS00525 | 37230..38414 | + | 1185 | WP_022650005 | hypothetical protein | trbB |
| LI65_RS00530 (LI65_01060) | 38418..40718 | + | 2301 | WP_022650006 | F-type conjugative transfer protein TrbC | - |
| LI65_RS00535 (LI65_00570) | 40792..41061 | + | 270 | WP_022650007 | hypothetical protein | - |
| LI65_RS27625 | 41195..41398 | + | 204 | WP_123839396 | hypothetical protein | - |