T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 795..18291
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LI65_RS27985 (LI65_00035) | 319..795 | + | 477 | WP_223226686 | traK protein | - |
| LI65_RS00035 (LI65_00040) | 795..2327 | + | 1533 | WP_020323171 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| LI65_RS00040 (LI65_01005) | 2332..5550 | + | 3219 | WP_020323154 | MobF family relaxase | - |
| LI65_RS00045 (LI65_00050) | 5547..6212 | + | 666 | WP_020323157 | DUF6710 family protein | - |
| LI65_RS00050 (LI65_00055) | 6205..6567 | + | 363 | WP_020323170 | hypothetical protein | - |
| LI65_RS00055 (LI65_00060) | 7183..7494 | - | 312 | WP_032416518 | hypothetical protein | - |
| LI65_RS00060 (LI65_00065) | 7491..7958 | - | 468 | WP_046092601 | phospholipase D family protein | - |
| LI65_RS00065 (LI65_00070) | 8015..9016 | - | 1002 | WP_020323165 | ATPase, T2SS/T4P/T4SS family | virB11 |
| LI65_RS00070 (LI65_00075) | 9067..10200 | - | 1134 | WP_020323153 | type IV secretion system protein VirB10 | virB10 |
| LI65_RS00075 (LI65_00080) | 10200..11087 | - | 888 | WP_020323166 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| LI65_RS00080 (LI65_00085) | 11098..11793 | - | 696 | WP_001208352 | type IV secretion system protein | virB8 |
| LI65_RS28245 | 11804..11935 | - | 132 | WP_032493177 | hypothetical protein | - |
| LI65_RS00085 (LI65_00090) | 12012..13049 | - | 1038 | WP_020323169 | type IV secretion system protein | virB6 |
| LI65_RS00090 (LI65_00095) | 13066..13308 | - | 243 | WP_000858958 | EexN family lipoprotein | - |
| LI65_RS00095 (LI65_00100) | 13318..14019 | - | 702 | WP_020323143 | type IV secretion system protein | virB5 |
| LI65_RS00100 (LI65_00105) | 14035..16608 | - | 2574 | WP_020323176 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| LI65_RS00105 (LI65_00110) | 16609..16926 | - | 318 | WP_000462629 | VirB3 family type IV secretion system protein | virB3 |
| LI65_RS00110 (LI65_00115) | 16966..17262 | - | 297 | WP_015060075 | TrbC/VirB2 family protein | virB2 |
| LI65_RS00115 (LI65_00120) | 17509..18291 | - | 783 | WP_032416587 | lytic transglycosylase domain-containing protein | virB1 |
| LI65_RS00120 (LI65_00125) | 18391..18708 | + | 318 | WP_032449361 | H-NS histone family protein | - |
| LI65_RS00125 (LI65_00130) | 18712..19062 | + | 351 | WP_032416642 | hypothetical protein | - |
| LI65_RS00130 (LI65_00135) | 19059..19397 | + | 339 | WP_223226685 | hypothetical protein | - |
| LI65_RS00135 (LI65_00140) | 19401..19709 | + | 309 | WP_032416643 | hypothetical protein | - |
| LI65_RS00140 (LI65_00145) | 19994..20179 | + | 186 | WP_006118530 | ribbon-helix-helix domain-containing protein | - |
| LI65_RS00145 (LI65_00150) | 20176..20784 | - | 609 | WP_032449362 | recombinase family protein | - |
| LI65_RS00150 (LI65_01010) | 20950..21282 | - | 333 | WP_020323168 | hypothetical protein | - |
| LI65_RS00155 (LI65_00160) | 21422..22303 | + | 882 | WP_020323144 | replication protein RepA | - |
| LI65_RS26790 (LI65_00165) | 22826..23014 | + | 189 | WP_000957857 | hypothetical protein | - |