T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 80537..102378
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LN400_RS27025 | 75597..76004 | + | 408 | WP_015632445 | transposase | - |
| LN400_RS27030 | 76001..76350 | + | 350 | Protein_92 | IS66 family insertion sequence element accessory protein TnpB | - |
| LN400_RS27035 | 76380..77969 | + | 1590 | WP_015632444 | IS66 family transposase | - |
| LN400_RS27040 | 77992..78297 | - | 306 | WP_015632443 | phospholipase D-like domain-containing protein | - |
| LN400_RS27045 | 78343..80535 | - | 2193 | WP_015632442 | F-type conjugative transfer protein TrbC | - |
| LN400_RS27050 | 80537..81691 | - | 1155 | WP_015632441 | thioredoxin fold domain-containing protein | trbB |
| LN400_RS27055 | 81639..83057 | - | 1419 | WP_015632440 | hypothetical protein | trbA |
| LN400_RS27060 | 83159..83755 | - | 597 | WP_123677147 | plasmid IncI1-type surface exclusion protein ExcA | - |
| LN400_RS27065 | 83848..85992 | - | 2145 | WP_015632438 | DotA/TraY family protein | traY |
| LN400_RS27070 | 86034..86615 | - | 582 | WP_015632437 | conjugal transfer protein TraX | - |
| LN400_RS27075 | 86612..87808 | - | 1197 | WP_015632436 | conjugal transfer protein TraW | traW |
| LN400_RS27080 | 87819..90866 | - | 3048 | WP_015632435 | conjugal transfer protein | traU |
| LN400_RS27085 | 90876..91439 | - | 564 | WP_032495746 | hypothetical protein | traT |
| LN400_RS27090 | 91483..91884 | - | 402 | WP_015632433 | DUF6750 family protein | traR |
| LN400_RS27095 | 91938..92471 | - | 534 | WP_015632432 | conjugal transfer protein TraQ | traQ |
| LN400_RS27100 | 92481..93200 | - | 720 | WP_015632431 | conjugal transfer protein TraP | traP |
| LN400_RS27105 | 93206..94546 | - | 1341 | WP_015632430 | conjugal transfer protein TraO | traO |
| LN400_RS27110 | 94550..95653 | - | 1104 | WP_015632429 | DotH/IcmK family type IV secretion protein | traN |
| LN400_RS27115 | 95664..96368 | - | 705 | WP_015632428 | DotI/IcmL/TraM family protein | traM |
| LN400_RS27120 | 96404..96757 | - | 354 | WP_015632427 | hypothetical protein | traL |
| LN400_RS27125 | 96791..100114 | - | 3324 | WP_032495745 | LPD7 domain-containing protein | - |
| LN400_RS27130 | 100132..100398 | - | 267 | WP_032441926 | IcmT/TraK family protein | traK |
| LN400_RS27135 | 100395..101582 | - | 1188 | WP_032495744 | plasmid transfer ATPase TraJ | virB11 |
| LN400_RS27140 | 101560..102378 | - | 819 | WP_015632425 | type IV secretory system conjugative DNA transfer family protein | traI |
| LN400_RS27145 | 102375..102842 | - | 468 | WP_015632424 | DotD/TraH family lipoprotein | - |
| LN400_RS27150 | 102865..103344 | - | 480 | WP_015632423 | lytic transglycosylase domain-containing protein | - |
| LN400_RS27155 | 103357..103962 | - | 606 | WP_015632422 | hypothetical protein | - |
| LN400_RS27160 | 104042..104353 | - | 312 | WP_015632421 | hypothetical protein | - |
| LN400_RS27165 | 104387..104590 | - | 204 | WP_032495743 | hypothetical protein | - |
| LN400_RS27170 | 104608..105075 | - | 468 | WP_032495742 | transcription termination/antitermination NusG family protein | - |
| LN400_RS27175 | 105409..105987 | + | 579 | WP_015632419 | hypothetical protein | - |
| LN400_RS27180 | 105969..106439 | + | 471 | WP_032441927 | hypothetical protein | - |
| LN400_RS27185 | 106439..106825 | + | 387 | WP_015632417 | acyl-CoA thioesterase | - |