T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 75605..101675
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV163_RS24660 (HV163_24660) | 75605..77812 | - | 2208 | WP_001568075 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HV163_RS24665 (HV163_24665) | 77997..78728 | - | 732 | WP_001568076 | conjugal transfer complement resistance protein TraT | - |
| HV163_RS24670 (HV163_24670) | 78906..79433 | - | 528 | WP_024191983 | conjugal transfer protein TraS | - |
| HV163_RS24675 (HV163_24675) | 79439..82288 | - | 2850 | WP_001568078 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HV163_RS24680 (HV163_24680) | 82288..83658 | - | 1371 | WP_023332869 | conjugal transfer pilus assembly protein TraH | traH |
| HV163_RS24685 (HV163_24685) | 83645..84181 | - | 537 | WP_032160235 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HV163_RS24690 (HV163_24690) | 84201..84434 | - | 234 | WP_001568081 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HV163_RS24695 (HV163_24695) | 84445..85194 | - | 750 | WP_001568082 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HV163_RS24700 (HV163_24700) | 85210..85542 | - | 333 | WP_001568083 | hypothetical protein | - |
| HV163_RS24705 (HV163_24705) | 85539..85799 | - | 261 | WP_001568084 | conjugal transfer protein TrbE | - |
| HV163_RS24710 (HV163_24710) | 85812..87704 | - | 1893 | WP_001568085 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HV163_RS24715 (HV163_24715) | 87701..88327 | - | 627 | WP_074184524 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HV163_RS24720 (HV163_24720) | 88340..89332 | - | 993 | WP_023332868 | conjugal transfer pilus assembly protein TraU | traU |
| HV163_RS24725 (HV163_24725) | 89343..89972 | - | 630 | WP_023332867 | type-F conjugative transfer system protein TraW | traW |
| HV163_RS24730 (HV163_24730) | 89969..90346 | - | 378 | WP_001568089 | type-F conjugative transfer system protein TrbI | - |
| HV163_RS24735 (HV163_24735) | 90346..92985 | - | 2640 | WP_001568090 | type IV secretion system protein TraC | virb4 |
| HV163_RS24740 (HV163_24740) | 93448..93846 | - | 399 | WP_001568092 | hypothetical protein | - |
| HV163_RS26020 | 93851..94222 | - | 372 | WP_223861966 | hypothetical protein | - |
| HV163_RS24750 (HV163_24750) | 94378..94947 | - | 570 | WP_001568094 | type IV conjugative transfer system lipoprotein TraV | traV |
| HV163_RS24755 (HV163_24755) | 94966..95202 | - | 237 | WP_001568098 | hypothetical protein | virb4 |
| HV163_RS24760 (HV163_24760) | 95195..96607 | - | 1413 | WP_001568100 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HV163_RS24765 (HV163_24765) | 96607..97347 | - | 741 | WP_001568101 | type-F conjugative transfer system secretin TraK | traK |
| HV163_RS24770 (HV163_24770) | 97334..97900 | - | 567 | WP_001568102 | type IV conjugative transfer system protein TraE | traE |
| HV163_RS24775 (HV163_24775) | 97919..98224 | - | 306 | WP_024191986 | type IV conjugative transfer system protein TraL | traL |
| HV163_RS24780 (HV163_24780) | 98238..98606 | - | 369 | WP_001568104 | type IV conjugative transfer system pilin TraA | - |
| HV163_RS24785 (HV163_24785) | 98686..99054 | - | 369 | WP_001568105 | type IV conjugative transfer system pilin TraA | - |
| HV163_RS24790 (HV163_24790) | 99133..99297 | - | 165 | WP_071594636 | TraY domain-containing protein | - |
| HV163_RS24795 (HV163_24795) | 99472..100161 | - | 690 | WP_001568106 | helix-turn-helix domain-containing protein | - |
| HV163_RS24800 (HV163_24800) | 100381..100767 | - | 387 | WP_001568107 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HV163_RS24805 (HV163_24805) | 101190..101675 | + | 486 | WP_032629900 | transglycosylase SLT domain-containing protein | virB1 |
| HV163_RS24810 (HV163_24810) | 101708..102016 | - | 309 | WP_023332865 | DUF5983 family protein | - |
| HV163_RS24815 (HV163_24815) | 102082..102696 | - | 615 | Protein_117 | DUF932 domain-containing protein | - |
| HV163_RS24825 (HV163_24825) | 103944..104150 | - | 207 | Protein_119 | DUF945 domain-containing protein | - |
| HV163_RS26125 | 104548..104679 | + | 132 | WP_255344245 | hypothetical protein | - |
| HV163_RS24830 (HV163_24830) | 104941..105039 | - | 99 | Protein_121 | Hok/Gef family protein | - |
| HV163_RS26180 | 105011..105073 | - | 63 | Protein_122 | hypothetical protein | - |
| HV163_RS24835 (HV163_24835) | 105174..106253 | + | 1080 | WP_181561685 | IS481-like element ISKpn28 family transposase | - |