T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 45614..70760
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HK406_RS24230 | 41645..41878 | - | 234 | WP_001191890 | hypothetical protein | - |
| HK406_RS24235 | 41860..42477 | - | 618 | WP_001249395 | hypothetical protein | - |
| HK406_RS24240 | 42645..45617 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| HK406_RS24245 | 45614..47479 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HK406_RS24250 | 47529..48074 | + | 546 | WP_000228720 | hypothetical protein | - |
| HK406_RS24255 | 48031..48660 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HK406_RS24260 | 48670..49116 | + | 447 | WP_000122507 | hypothetical protein | - |
| HK406_RS24265 | 49126..49503 | + | 378 | WP_000869297 | hypothetical protein | - |
| HK406_RS24270 | 49503..50165 | + | 663 | WP_001231464 | hypothetical protein | - |
| HK406_RS24275 | 50346..50489 | + | 144 | WP_001275801 | hypothetical protein | - |
| HK406_RS24280 | 50501..50866 | + | 366 | WP_001052531 | hypothetical protein | - |
| HK406_RS24285 | 51011..51292 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HK406_RS24290 | 51289..51915 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HK406_RS24295 | 51899..52816 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HK406_RS24300 | 52816..54129 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HK406_RS24305 | 54126..54704 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HK406_RS24310 | 54708..55100 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HK406_RS24315 | 55301..60787 | + | 5487 | WP_170851375 | Ig-like domain-containing protein | - |
| HK406_RS24320 | 60936..61643 | + | 708 | WP_001259346 | DsbC family protein | - |
| HK406_RS24325 | 61640..64087 | + | 2448 | WP_000637384 | type IV secretion system protein TraC | virb4 |
| HK406_RS24330 | 64102..64419 | + | 318 | WP_000351984 | hypothetical protein | - |
| HK406_RS24335 | 64416..64946 | + | 531 | WP_001010740 | S26 family signal peptidase | - |
| HK406_RS24340 | 64909..66174 | + | 1266 | WP_001447719 | TrbC family F-type conjugative pilus assembly protein | traW |
| HK406_RS24345 | 66171..66842 | + | 672 | WP_170851376 | EAL domain-containing protein | - |
| HK406_RS24350 | 66842..67846 | + | 1005 | WP_005507569 | TraU family protein | traU |
| HK406_RS24355 | 67962..70760 | + | 2799 | WP_024126922 | conjugal transfer mating pair stabilization protein TraN | traN |
| HK406_RS24360 | 70799..71659 | - | 861 | WP_000709517 | hypothetical protein | - |
| HK406_RS24365 | 71782..72423 | - | 642 | WP_000796664 | hypothetical protein | - |
| HK406_RS24370 | 72717..73037 | + | 321 | WP_000547566 | hypothetical protein | - |
| HK406_RS24375 | 73341..73526 | + | 186 | WP_001186917 | hypothetical protein | - |
| HK406_RS24380 | 73746..74714 | + | 969 | WP_000085162 | AAA family ATPase | - |
| HK406_RS24385 | 74725..75633 | + | 909 | WP_000739139 | hypothetical protein | - |