T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 33824..58958
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EM861_RS24350 (EM861_24765) | 33824..36034 | - | 2211 | WP_159115395 | type IV conjugative transfer system coupling protein TraD | virb4 |
| EM861_RS24355 (EM861_24770) | 36168..36842 | - | 675 | WP_008324909 | tetratricopeptide repeat protein | - |
| EM861_RS24360 (EM861_24775) | 36917..37348 | - | 432 | WP_008324118 | entry exclusion protein | - |
| EM861_RS24365 (EM861_24780) | 37370..40192 | - | 2823 | WP_159115396 | conjugal transfer mating-pair stabilization protein TraG | traG |
| EM861_RS24370 (EM861_24785) | 40192..41562 | - | 1371 | WP_016247527 | conjugal transfer pilus assembly protein TraH | traH |
| EM861_RS24375 (EM861_24790) | 41549..41977 | - | 429 | WP_008324122 | hypothetical protein | - |
| EM861_RS24380 (EM861_24795) | 41970..42524 | - | 555 | WP_008324125 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| EM861_RS24385 (EM861_24800) | 42514..42762 | - | 249 | WP_016479982 | type-F conjugative transfer system pilin chaperone TraQ | - |
| EM861_RS24390 (EM861_24805) | 42779..43528 | - | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| EM861_RS24395 (EM861_24810) | 43559..43747 | - | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| EM861_RS24400 (EM861_24815) | 43779..45632 | - | 1854 | WP_016479983 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| EM861_RS24405 (EM861_24820) | 45629..46258 | - | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| EM861_RS24410 (EM861_24825) | 46275..47261 | - | 987 | WP_042934586 | conjugal transfer pilus assembly protein TraU | traU |
| EM861_RS24415 (EM861_24830) | 47264..47911 | - | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| EM861_RS24420 (EM861_24835) | 47911..48258 | - | 348 | WP_008324133 | type-F conjugative transfer system protein TrbI | - |
| EM861_RS24425 (EM861_24840) | 48255..50885 | - | 2631 | WP_008324134 | type IV secretion system protein TraC | virb4 |
| EM861_RS24430 (EM861_24845) | 50878..51444 | - | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| EM861_RS24435 (EM861_24850) | 51434..51835 | - | 402 | WP_016479985 | hypothetical protein | - |
| EM861_RS24440 (EM861_24855) | 51819..52004 | - | 186 | WP_008324139 | hypothetical protein | - |
| EM861_RS24445 (EM861_24860) | 52008..52232 | - | 225 | WP_008324141 | TraR/DksA C4-type zinc finger protein | - |
| EM861_RS24450 (EM861_24865) | 52352..52891 | - | 540 | WP_016247533 | type IV conjugative transfer system lipoprotein TraV | traV |
| EM861_RS24455 (EM861_24870) | 52913..54307 | - | 1395 | WP_016479986 | F-type conjugal transfer pilus assembly protein TraB | traB |
| EM861_RS24460 (EM861_24875) | 54294..55037 | - | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| EM861_RS24465 (EM861_24880) | 55024..55590 | - | 567 | WP_016247535 | type IV conjugative transfer system protein TraE | traE |
| EM861_RS24470 (EM861_24885) | 55605..55910 | - | 306 | WP_008324160 | type IV conjugative transfer system protein TraL | traL |
| EM861_RS24475 (EM861_24890) | 56061..56411 | - | 351 | WP_016247536 | type IV conjugative transfer system pilin TraA | - |
| EM861_RS24480 (EM861_24895) | 56469..56693 | - | 225 | WP_008324165 | TraY domain-containing protein | - |
| EM861_RS24485 (EM861_24900) | 56780..57469 | - | 690 | WP_008324166 | hypothetical protein | - |
| EM861_RS24490 (EM861_24905) | 57658..58050 | - | 393 | WP_008324167 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| EM861_RS24495 (EM861_24910) | 58482..58958 | + | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | virB1 |
| EM861_RS24500 (EM861_24915) | 59005..59535 | - | 531 | WP_008324170 | antirestriction protein | - |
| EM861_RS24505 (EM861_24920) | 60162..60992 | - | 831 | WP_008324171 | N-6 DNA methylase | - |
| EM861_RS24510 (EM861_24925) | 61035..61298 | - | 264 | WP_008324174 | hypothetical protein | - |
| EM861_RS24515 (EM861_24930) | 61384..61728 | - | 345 | WP_008324177 | hypothetical protein | - |
| EM861_RS24520 (EM861_24935) | 61775..62062 | - | 288 | WP_008324178 | hypothetical protein | - |
| EM861_RS24525 (EM861_24940) | 62116..62490 | - | 375 | WP_008324180 | hypothetical protein | - |
| EM861_RS24530 (EM861_24945) | 63117..63476 | - | 360 | WP_015493069 | hypothetical protein | - |
| EM861_RS24535 (EM861_24950) | 63538..63861 | - | 324 | WP_008324183 | hypothetical protein | - |