T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 525421..538461
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NXC12_RS28125 (NXC12_PD00495) | 523688..524254 | + | 567 | WP_086083974 | conjugative transfer signal peptidase TraF | - |
| NXC12_RS28130 (NXC12_PD00496) | 524244..525404 | + | 1161 | WP_086083975 | conjugal transfer protein TraB | - |
| NXC12_RS28135 (NXC12_PD00497) | 525421..526032 | + | 612 | WP_086083976 | TraH family protein | virB1 |
| NXC12_RS28140 (NXC12_PD00498) | 526049..526426 | - | 378 | WP_086083977 | DUF5615 family PIN-like protein | - |
| NXC12_RS28145 (NXC12_PD00499) | 526423..527055 | - | 633 | WP_086083978 | DUF433 domain-containing protein | - |
| NXC12_RS28150 (NXC12_PD00500) | 527235..527447 | - | 213 | WP_085780566 | helix-turn-helix transcriptional regulator | - |
| NXC12_RS28155 (NXC12_PD00501) | 527645..527962 | + | 318 | WP_086083979 | transcriptional repressor TraM | - |
| NXC12_RS28160 (NXC12_PD00502) | 527966..528670 | - | 705 | WP_198388425 | autoinducer binding domain-containing protein | - |
| NXC12_RS28165 (NXC12_PD00504) | 528977..530278 | - | 1302 | WP_086083981 | IncP-type conjugal transfer protein TrbI | virB10 |
| NXC12_RS28170 (NXC12_PD00505) | 530290..530724 | - | 435 | WP_086083982 | conjugal transfer protein TrbH | - |
| NXC12_RS28175 (NXC12_PD00506) | 530728..531540 | - | 813 | WP_086083983 | P-type conjugative transfer protein TrbG | virB9 |
| NXC12_RS28180 (NXC12_PD00507) | 531558..532220 | - | 663 | WP_085780571 | conjugal transfer protein TrbF | virB8 |
| NXC12_RS28185 (NXC12_PD00508) | 532245..533423 | - | 1179 | WP_086083984 | P-type conjugative transfer protein TrbL | virB6 |
| NXC12_RS28195 (NXC12_PD00509) | 533596..534399 | - | 804 | WP_085780573 | P-type conjugative transfer protein TrbJ | virB5 |
| NXC12_RS28200 (NXC12_PD00510) | 534371..536827 | - | 2457 | WP_086083985 | conjugal transfer protein TrbE | virb4 |
| NXC12_RS28205 (NXC12_PD00511) | 536837..537136 | - | 300 | WP_085780575 | conjugal transfer protein TrbD | virB3 |
| NXC12_RS28210 (NXC12_PD00512) | 537129..537494 | - | 366 | WP_085780576 | TrbC/VirB2 family protein | virB2 |
| NXC12_RS28215 (NXC12_PD00513) | 537484..538461 | - | 978 | WP_086083986 | P-type conjugative transfer ATPase TrbB | virB11 |
| NXC12_RS28220 (NXC12_PD00514) | 538481..539098 | - | 618 | WP_086083987 | acyl-homoserine-lactone synthase TraI | - |
| NXC12_RS28225 (NXC12_PD00515) | 539488..540702 | + | 1215 | WP_086083988 | plasmid partitioning protein RepA | - |
| NXC12_RS28230 (NXC12_PD00516) | 540699..541724 | + | 1026 | WP_086083989 | plasmid partitioning protein RepB | - |
| NXC12_RS28235 (NXC12_PD00518) | 541881..543095 | + | 1215 | WP_086083990 | plasmid replication protein RepC | - |