T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 1453..12669
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L63_RS24640 (L6L63_24640) | 1453..2091 | - | 639 | WP_001104086 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| L6L63_RS24645 (L6L63_24645) | 2119..2571 | - | 453 | WP_000069427 | hypothetical protein | - |
| L6L63_RS24650 (L6L63_24650) | 2601..3062 | - | 462 | WP_000277845 | hypothetical protein | - |
| L6L63_RS24655 (L6L63_24655) | 3088..4080 | - | 993 | WP_240725012 | conjugal transfer pilus assembly protein TraU | traU |
| L6L63_RS24660 (L6L63_24660) | 4077..4709 | - | 633 | WP_001203745 | type-F conjugative transfer system protein TraW | traW |
| L6L63_RS24665 (L6L63_24665) | 4706..5092 | - | 387 | WP_000214084 | type-F conjugative transfer system protein TrbI | - |
| L6L63_RS24670 (L6L63_24670) | 5089..7716 | - | 2628 | WP_063082140 | type IV secretion system protein TraC | virb4 |
| L6L63_RS24675 (L6L63_24675) | 7876..8097 | - | 222 | WP_001278689 | conjugal transfer protein TraR | - |
| L6L63_RS24680 (L6L63_24680) | 8232..8747 | - | 516 | WP_000724020 | type IV conjugative transfer system lipoprotein TraV | traV |
| L6L63_RS24685 (L6L63_24685) | 8747..9064 | - | 318 | WP_240725013 | conjugal transfer protein TrbD | - |
| L6L63_RS24690 (L6L63_24690) | 9051..9638 | - | 588 | WP_000002771 | conjugal transfer pilus-stabilizing protein TraP | - |
| L6L63_RS24695 (L6L63_24695) | 9628..11055 | - | 1428 | WP_000146636 | F-type conjugal transfer pilus assembly protein TraB | traB |
| L6L63_RS24700 (L6L63_24700) | 11055..11783 | - | 729 | WP_001230787 | type-F conjugative transfer system secretin TraK | traK |
| L6L63_RS24705 (L6L63_24705) | 11770..12336 | - | 567 | WP_000399792 | type IV conjugative transfer system protein TraE | traE |
| L6L63_RS24710 (L6L63_24710) | 12358..12669 | - | 312 | WP_000012106 | type IV conjugative transfer system protein TraL | traL |
| L6L63_RS24715 (L6L63_24715) | 12684..13049 | - | 366 | WP_021519752 | type IV conjugative transfer system pilin TraA | - |
| L6L63_RS24720 (L6L63_24720) | 13092..13307 | - | 216 | WP_000086380 | conjugal transfer relaxosome protein TraY | - |
| L6L63_RS24725 (L6L63_24725) | 13443..14090 | - | 648 | WP_072855064 | conjugal transfer transcriptional regulator TraJ | - |
| L6L63_RS24730 (L6L63_24730) | 14282..14665 | - | 384 | WP_001151533 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| L6L63_RS24735 (L6L63_24735) | 15019..15588 | + | 570 | Protein_20 | transglycosylase SLT domain-containing protein | - |
| L6L63_RS24740 (L6L63_24740) | 15886..16707 | - | 822 | WP_001444560 | DUF932 domain-containing protein | - |
| L6L63_RS24745 (L6L63_24745) | 16814..17110 | - | 297 | WP_114447253 | hypothetical protein | - |
| L6L63_RS24750 (L6L63_24750) | 17134..17340 | - | 207 | WP_000547945 | hypothetical protein | - |
| L6L63_RS24755 (L6L63_24755) | 17368..17582 | + | 215 | Protein_24 | hypothetical protein | - |