T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 16230..58789
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L63_RS23415 (L6L63_23420) | 13946..16237 | - | 2292 | WP_240724999 | F-type conjugative transfer protein TrbC | - |
| L6L63_RS23420 (L6L63_23425) | 16230..17300 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| L6L63_RS23425 (L6L63_23430) | 17319..18527 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| L6L63_RS23430 (L6L63_23435) | 18819..18971 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| L6L63_RS23435 (L6L63_23440) | 19043..19294 | - | 252 | WP_001291965 | hypothetical protein | - |
| L6L63_RS23440 (L6L63_23445) | 19773..20528 | - | 756 | WP_001282653 | IS21-like element ISSso4 family helper ATPase IstB | - |
| L6L63_RS23445 (L6L63_23450) | 20545..22080 | - | 1536 | WP_045147483 | IS21 family transposase | - |
| L6L63_RS23450 (L6L63_23455) | 22862..23038 | - | 177 | WP_001054900 | hypothetical protein | - |
| L6L63_RS23455 (L6L63_23460) | 23430..23639 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| L6L63_RS23460 (L6L63_23465) | 23711..24373 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| L6L63_RS23465 (L6L63_23470) | 24444..26612 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| L6L63_RS23470 (L6L63_23475) | 26709..27293 | - | 585 | WP_001037985 | IncI1-type conjugal transfer protein TraX | - |
| L6L63_RS23475 (L6L63_23480) | 27322..28524 | - | 1203 | WP_001189156 | IncI1-type conjugal transfer protein TraW | traW |
| L6L63_RS23480 (L6L63_23485) | 28491..29105 | - | 615 | WP_000337400 | IncI1-type conjugal transfer protein TraV | traV |
| L6L63_RS23485 (L6L63_23490) | 29105..32149 | - | 3045 | WP_001024780 | IncI1-type conjugal transfer protein TraU | traU |
| L6L63_RS23490 (L6L63_23495) | 32239..33039 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| L6L63_RS23495 (L6L63_23500) | 33023..33211 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| L6L63_RS23500 (L6L63_23505) | 33275..33679 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| L6L63_RS23505 (L6L63_23510) | 33730..34257 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| L6L63_RS23510 (L6L63_23515) | 34257..34961 | - | 705 | WP_000801919 | IncI1-type conjugal transfer protein TraP | traP |
| L6L63_RS23515 (L6L63_23520) | 34961..36250 | - | 1290 | WP_033544219 | conjugal transfer protein TraO | traO |
| L6L63_RS23520 (L6L63_23525) | 36253..37236 | - | 984 | WP_021513963 | IncI1-type conjugal transfer protein TraN | traN |
| L6L63_RS23525 (L6L63_23530) | 37247..37939 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| L6L63_RS23530 (L6L63_23535) | 37936..38283 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| L6L63_RS23535 (L6L63_23540) | 38301..42068 | - | 3768 | WP_006855639 | LPD7 domain-containing protein | - |
| L6L63_RS23540 (L6L63_23545) | 42158..42427 | - | 270 | Protein_42 | phospholipase D-like domain-containing protein | - |
| L6L63_RS23545 (L6L63_23550) | 42495..43277 | - | 783 | WP_001300609 | IS21-like element IS100kyp family helper ATPase IstB | - |
| L6L63_RS23550 (L6L63_23555) | 43274..44296 | - | 1023 | WP_000255944 | IS21-like element IS100 family transposase | - |
| L6L63_RS23555 (L6L63_23560) | 44385..44669 | - | 285 | Protein_45 | phospholipase D-like domain-containing protein | - |
| L6L63_RS23560 (L6L63_23565) | 44684..44974 | - | 291 | WP_001299214 | hypothetical protein | traK |
| L6L63_RS23565 (L6L63_23570) | 44971..46119 | - | 1149 | WP_001024976 | plasmid transfer ATPase TraJ | virB11 |
| L6L63_RS23570 (L6L63_23575) | 46116..46934 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| L6L63_RS23575 (L6L63_23580) | 46931..47389 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| L6L63_RS23580 (L6L63_23585) | 47784..48368 | - | 585 | WP_061671621 | histidine phosphatase family protein | - |
| L6L63_RS23585 (L6L63_23590) | 48428..49630 | - | 1203 | WP_000976357 | conjugal transfer protein TraF | - |
| L6L63_RS23590 (L6L63_23595) | 49716..50540 | - | 825 | WP_015058912 | conjugal transfer protein TraE | traE |
| L6L63_RS23595 (L6L63_23600) | 50691..51845 | - | 1155 | WP_001139955 | site-specific integrase | - |
| L6L63_RS23600 (L6L63_23605) | 52331..52579 | + | 249 | WP_095110402 | hypothetical protein | - |
| L6L63_RS25390 | 52576..52770 | - | 195 | Protein_55 | hypothetical protein | - |
| L6L63_RS23605 (L6L63_23610) | 53205..54308 | - | 1104 | Protein_56 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| L6L63_RS23610 (L6L63_23615) | 54296..54952 | - | 657 | WP_001193551 | A24 family peptidase | - |
| L6L63_RS23615 (L6L63_23620) | 54937..55497 | - | 561 | WP_000014005 | lytic transglycosylase domain-containing protein | virB1 |
| L6L63_RS23620 (L6L63_23625) | 55507..56121 | - | 615 | WP_000908228 | type 4 pilus major pilin | - |
| L6L63_RS23625 (L6L63_23630) | 56138..57223 | - | 1086 | WP_001208803 | type II secretion system F family protein | - |
| L6L63_RS23630 (L6L63_23635) | 57236..58789 | - | 1554 | WP_000362204 | ATPase, T2SS/T4P/T4SS family | virB11 |
| L6L63_RS23635 (L6L63_23640) | 58800..59252 | - | 453 | WP_001247333 | type IV pilus biogenesis protein PilP | - |
| L6L63_RS23640 (L6L63_23645) | 59239..60534 | - | 1296 | WP_000752776 | type 4b pilus protein PilO2 | - |
| L6L63_RS23645 (L6L63_23650) | 60527..62209 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| L6L63_RS23650 (L6L63_23655) | 62223..62660 | - | 438 | WP_000539811 | type IV pilus biogenesis protein PilM | - |
| L6L63_RS23655 (L6L63_23660) | 62660..63727 | - | 1068 | WP_021513968 | type IV pilus biogenesis lipoprotein PilL | - |