T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 29606..52960
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L59_RS25870 (L6L59_25870) | 24931..25584 | - | 654 | WP_197733659 | hypothetical protein | - |
| L6L59_RS25875 (L6L59_25875) | 25596..26720 | - | 1125 | WP_000486716 | site-specific integrase | - |
| L6L59_RS26320 | 27133..27354 | - | 222 | Protein_39 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| L6L59_RS25880 (L6L59_25880) | 27668..28954 | - | 1287 | WP_015059540 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| L6L59_RS25885 (L6L59_25885) | 28967..29602 | - | 636 | WP_000934978 | A24 family peptidase | - |
| L6L59_RS25890 (L6L59_25890) | 29606..30088 | - | 483 | WP_001258095 | lytic transglycosylase domain-containing protein | virB1 |
| L6L59_RS25895 (L6L59_25895) | 30155..30712 | - | 558 | WP_000095049 | type 4 pilus major pilin | - |
| L6L59_RS25900 (L6L59_25900) | 30757..31866 | - | 1110 | WP_000974903 | type II secretion system F family protein | - |
| L6L59_RS25905 (L6L59_25905) | 31857..33395 | - | 1539 | WP_000466227 | ATPase, T2SS/T4P/T4SS family | virB11 |
| L6L59_RS25910 (L6L59_25910) | 33420..33914 | - | 495 | WP_000912553 | type IV pilus biogenesis protein PilP | - |
| L6L59_RS25915 (L6L59_25915) | 33898..35208 | - | 1311 | WP_001454111 | type 4b pilus protein PilO2 | - |
| L6L59_RS25920 (L6L59_25920) | 35259..36902 | - | 1644 | WP_001035588 | PilN family type IVB pilus formation outer membrane protein | - |
| L6L59_RS25925 (L6L59_25925) | 36895..37425 | - | 531 | WP_001220542 | sigma 54-interacting transcriptional regulator | virb4 |
| L6L59_RS25930 (L6L59_25930) | 37472..39430 | - | 1959 | WP_000338974 | type IV secretory system conjugative DNA transfer family protein | - |
| L6L59_RS25935 (L6L59_25935) | 39446..40501 | - | 1056 | WP_001059977 | P-type DNA transfer ATPase VirB11 | virB11 |
| L6L59_RS25940 (L6L59_25940) | 40520..41659 | - | 1140 | WP_000790641 | TrbI/VirB10 family protein | virB10 |
| L6L59_RS25945 (L6L59_25945) | 41649..42350 | - | 702 | WP_000274524 | TrbG/VirB9 family P-type conjugative transfer protein | - |
| L6L59_RS25950 (L6L59_25950) | 42416..43150 | - | 735 | WP_000432283 | type IV secretion system protein | virB8 |
| L6L59_RS25955 (L6L59_25955) | 43316..45673 | - | 2358 | WP_000548950 | VirB4 family type IV secretion system protein | virb4 |
| L6L59_RS25960 (L6L59_25960) | 45679..45999 | - | 321 | WP_000362080 | VirB3 family type IV secretion system protein | virB3 |
| L6L59_RS25965 (L6L59_25965) | 46070..46360 | - | 291 | WP_000865479 | conjugal transfer protein | - |
| L6L59_RS25970 (L6L59_25970) | 46360..46944 | - | 585 | WP_001177114 | lytic transglycosylase domain-containing protein | virB1 |
| L6L59_RS25975 (L6L59_25975) | 46965..47363 | - | 399 | WP_001153669 | hypothetical protein | - |
| L6L59_RS25980 (L6L59_25980) | 47482..47919 | - | 438 | WP_000539665 | type IV pilus biogenesis protein PilM | - |
| L6L59_RS25985 (L6L59_25985) | 47925..49160 | - | 1236 | WP_063112255 | TcpQ domain-containing protein | - |
| L6L59_RS25990 (L6L59_25990) | 49163..49462 | - | 300 | WP_000835763 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| L6L59_RS25995 (L6L59_25995) | 49529..50164 | - | 636 | WP_077135686 | hypothetical protein | - |
| L6L59_RS26000 (L6L59_26000) | 50245..51003 | + | 759 | WP_224482110 | DUF5710 domain-containing protein | - |
| L6L59_RS26005 (L6L59_26005) | 51081..51317 | - | 237 | WP_000750964 | EexN family lipoprotein | - |
| L6L59_RS26010 (L6L59_26010) | 51321..51968 | - | 648 | WP_000653673 | type IV secretion system protein | - |
| L6L59_RS26015 (L6L59_26015) | 51974..52960 | - | 987 | WP_001028544 | type IV secretion system protein | virB6 |
| L6L59_RS26020 (L6L59_26020) | 52964..53221 | - | 258 | WP_000739144 | hypothetical protein | - |
| L6L59_RS26025 (L6L59_26025) | 53218..53520 | - | 303 | WP_001485001 | hypothetical protein | - |
| L6L59_RS26030 (L6L59_26030) | 53792..54445 | - | 654 | WP_053899054 | hypothetical protein | - |
| L6L59_RS26035 (L6L59_26035) | 54630..55073 | - | 444 | WP_022645140 | NfeD family protein | - |
| L6L59_RS26040 (L6L59_26040) | 55453..56406 | - | 954 | WP_072089442 | SPFH domain-containing protein | - |
| L6L59_RS26045 (L6L59_26045) | 56433..56609 | - | 177 | WP_000753050 | hypothetical protein | - |
| L6L59_RS26050 (L6L59_26050) | 56602..56817 | - | 216 | WP_001127357 | DUF1187 family protein | - |
| L6L59_RS26055 (L6L59_26055) | 56810..57262 | - | 453 | WP_000101552 | CaiF/GrlA family transcriptional regulator | - |