T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 57312..98290
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6L66_RS23140 (L6L66_23140) | 55028..57319 | - | 2292 | WP_001289276 | F-type conjugative transfer protein TrbC | - |
| L6L66_RS23145 (L6L66_23145) | 57312..58382 | - | 1071 | WP_000151583 | IncI1-type conjugal transfer protein TrbB | trbB |
| L6L66_RS23150 (L6L66_23150) | 58401..59609 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| L6L66_RS23155 (L6L66_23155) | 59901..60053 | + | 153 | WP_001331364 | Hok/Gef family protein | - |
| L6L66_RS23160 (L6L66_23160) | 60125..60376 | - | 252 | WP_001291964 | hypothetical protein | - |
| L6L66_RS24210 | 60875..60970 | + | 96 | WP_001303310 | DinQ-like type I toxin DqlB | - |
| L6L66_RS23170 (L6L66_23170) | 61035..61211 | - | 177 | WP_001054904 | hypothetical protein | - |
| L6L66_RS23175 (L6L66_23175) | 61603..61812 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| L6L66_RS23180 (L6L66_23180) | 61884..62534 | - | 651 | WP_001178506 | plasmid IncI1-type surface exclusion protein ExcA | - |
| L6L66_RS23185 (L6L66_23185) | 62608..64776 | - | 2169 | WP_021537350 | DotA/TraY family protein | traY |
| L6L66_RS23190 (L6L66_23190) | 64873..65457 | - | 585 | WP_001037987 | IncI1-type conjugal transfer protein TraX | - |
| L6L66_RS23195 (L6L66_23195) | 65486..66688 | - | 1203 | WP_001189160 | IncI1-type conjugal transfer protein TraW | traW |
| L6L66_RS23200 (L6L66_23200) | 66655..67269 | - | 615 | WP_000337398 | IncI1-type conjugal transfer protein TraV | traV |
| L6L66_RS23205 (L6L66_23205) | 67269..70313 | - | 3045 | WP_021265678 | IncI1-type conjugal transfer protein TraU | traU |
| L6L66_RS23210 (L6L66_23210) | 70403..71203 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| L6L66_RS23215 (L6L66_23215) | 71187..71375 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| L6L66_RS23220 (L6L66_23220) | 71439..71843 | - | 405 | WP_000086958 | IncI1-type conjugal transfer protein TraR | traR |
| L6L66_RS23225 (L6L66_23225) | 71894..72421 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| L6L66_RS23230 (L6L66_23230) | 72421..73125 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| L6L66_RS23235 (L6L66_23235) | 73125..74414 | - | 1290 | WP_001272003 | conjugal transfer protein TraO | traO |
| L6L66_RS23240 (L6L66_23240) | 74417..75400 | - | 984 | WP_001191877 | IncI1-type conjugal transfer protein TraN | traN |
| L6L66_RS23245 (L6L66_23245) | 75411..76103 | - | 693 | WP_000138550 | DotI/IcmL family type IV secretion protein | traM |
| L6L66_RS23250 (L6L66_23250) | 76100..76447 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| L6L66_RS23255 (L6L66_23255) | 76465..80232 | - | 3768 | WP_001141527 | LPD7 domain-containing protein | - |
| L6L66_RS23260 (L6L66_23260) | 80321..80872 | - | 552 | WP_000014583 | phospholipase D family protein | - |
| L6L66_RS23265 (L6L66_23265) | 80887..81177 | - | 291 | WP_001299214 | hypothetical protein | traK |
| L6L66_RS23270 (L6L66_23270) | 81174..82322 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| L6L66_RS23275 (L6L66_23275) | 82319..83137 | - | 819 | WP_000646098 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| L6L66_RS23280 (L6L66_23280) | 83134..83592 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| L6L66_RS23285 (L6L66_23285) | 83987..84571 | - | 585 | WP_000977522 | histidine phosphatase family protein | - |
| L6L66_RS23290 (L6L66_23290) | 84631..85833 | - | 1203 | WP_000976351 | conjugal transfer protein TraF | - |
| L6L66_RS23295 (L6L66_23295) | 85918..86742 | - | 825 | WP_001238939 | conjugal transfer protein TraE | traE |
| L6L66_RS23300 (L6L66_23300) | 86893..88047 | - | 1155 | WP_001139957 | site-specific integrase | - |
| L6L66_RS23305 (L6L66_23305) | 88341..89603 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| L6L66_RS23310 (L6L66_23310) | 89891..90766 | + | 876 | WP_013188473 | extended-spectrum class A beta-lactamase CTX-M-1 | - |
| L6L66_RS23315 (L6L66_23315) | 90813..91157 | - | 345 | Protein_107 | WbuC family cupin fold metalloprotein | - |
| L6L66_RS23320 (L6L66_23320) | 91157..91366 | + | 210 | Protein_108 | hypothetical protein | - |
| L6L66_RS24265 | 92133..92363 | + | 231 | Protein_109 | prepilin | - |
| L6L66_RS23325 (L6L66_23325) | 92360..93784 | - | 1425 | WP_001389385 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| L6L66_RS23330 (L6L66_23330) | 93784..94440 | - | 657 | WP_001193553 | prepilin peptidase | - |
| L6L66_RS23335 (L6L66_23335) | 94425..94985 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| L6L66_RS23340 (L6L66_23340) | 94995..95609 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| L6L66_RS23345 (L6L66_23345) | 95627..96724 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| L6L66_RS23350 (L6L66_23350) | 96737..98290 | - | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| L6L66_RS23355 (L6L66_23355) | 98301..98753 | - | 453 | WP_001247334 | type IV pilus biogenesis protein PilP | - |
| L6L66_RS23360 (L6L66_23360) | 98740..100035 | - | 1296 | WP_000752772 | type 4b pilus protein PilO2 | - |
| L6L66_RS23365 (L6L66_23365) | 100028..101710 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| L6L66_RS23370 (L6L66_23370) | 101724..102161 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| L6L66_RS23375 (L6L66_23375) | 102161..103228 | - | 1068 | WP_001302629 | type IV pilus biogenesis lipoprotein PilL | - |