T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 47482..72673
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTB48_RS00355 | 43507..43740 | - | 234 | WP_001191892 | hypothetical protein | - |
| HTB48_RS00360 (p164310_0295) | 43722..44339 | - | 618 | WP_001249396 | hypothetical protein | - |
| HTB48_RS00365 (p164310_0300) | 44507..47485 | + | 2979 | WP_001337757 | MobH family relaxase | - |
| HTB48_RS00370 (p164310_0305) | 47482..49347 | + | 1866 | WP_000178856 | conjugative transfer system coupling protein TraD | virb4 |
| HTB48_RS00375 (p164310_0310) | 49358..49942 | + | 585 | WP_000332866 | hypothetical protein | - |
| HTB48_RS00380 (p164310_0315) | 49899..50528 | + | 630 | WP_000743450 | DUF4400 domain-containing protein | tfc7 |
| HTB48_RS00385 (p164310_0320) | 50538..50984 | + | 447 | WP_000122506 | hypothetical protein | - |
| HTB48_RS00390 (p164310_0325) | 50994..51371 | + | 378 | WP_000869261 | hypothetical protein | - |
| HTB48_RS00395 (p164310_0330) | 51371..52033 | + | 663 | WP_001231463 | hypothetical protein | - |
| HTB48_RS00400 | 52214..52357 | + | 144 | WP_001275801 | hypothetical protein | - |
| HTB48_RS00405 (p164310_0335) | 52369..52734 | + | 366 | WP_001052531 | hypothetical protein | - |
| HTB48_RS00410 (p164310_0340) | 52879..53160 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HTB48_RS00415 | 53157..53783 | + | 627 | WP_001049716 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HTB48_RS00420 (p164310_0345) | 53767..54684 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HTB48_RS00425 (p164310_0350) | 54684..55997 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HTB48_RS00430 (p164310_0355) | 55994..56572 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTB48_RS00435 (p164310_0360) | 56576..56968 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HTB48_RS00440 (p164310_0365) | 57169..62700 | + | 5532 | WP_000606833 | Ig-like domain-containing protein | - |
| HTB48_RS00445 (p164310_0370) | 62849..63556 | + | 708 | WP_001259347 | DsbC family protein | - |
| HTB48_RS00450 (p164310_0375) | 63553..66000 | + | 2448 | WP_000637386 | type IV secretion system protein TraC | virb4 |
| HTB48_RS00455 (p164310_0380) | 66015..66332 | + | 318 | WP_000351984 | hypothetical protein | - |
| HTB48_RS00460 (p164310_0385) | 66329..66859 | + | 531 | WP_001010738 | S26 family signal peptidase | - |
| HTB48_RS00465 (p164310_0390) | 66822..68087 | + | 1266 | WP_000621288 | TrbC family F-type conjugative pilus assembly protein | traW |
| HTB48_RS00470 (p164310_0395) | 68084..68755 | + | 672 | WP_001337754 | EAL domain-containing protein | - |
| HTB48_RS00475 (p164310_0400) | 68755..69759 | + | 1005 | WP_043940352 | TraU family protein | traU |
| HTB48_RS00480 (p164310_0405) | 69875..72673 | + | 2799 | WP_001256487 | conjugal transfer mating pair stabilization protein TraN | traN |
| HTB48_RS00485 (p164310_0410) | 72712..73572 | - | 861 | WP_000709517 | hypothetical protein | - |
| HTB48_RS00490 (p164310_0415) | 73695..74336 | - | 642 | WP_000796664 | hypothetical protein | - |
| HTB48_RS00495 (p164310_0420) | 74630..74950 | + | 321 | WP_000547566 | hypothetical protein | - |
| HTB48_RS00500 | 75254..75439 | + | 186 | WP_001186917 | hypothetical protein | - |
| HTB48_RS00505 (p164310_0425) | 75659..76627 | + | 969 | WP_000085162 | AAA family ATPase | - |
| HTB48_RS00510 (p164310_0430) | 76638..77546 | + | 909 | WP_000739139 | hypothetical protein | - |