T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 12276..36701
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SEEB0189_RS23045 (SEEB0189_000050) | 12276..14510 | - | 2235 | WP_020833547 | type IV conjugative transfer system coupling protein TraD | virb4 |
| SEEB0189_RS23050 (SEEB0189_000055) | 14661..15398 | - | 738 | WP_020833548 | conjugal transfer complement resistance protein TraT | - |
| SEEB0189_RS23055 (SEEB0189_000060) | 15574..16134 | - | 561 | WP_020833549 | hypothetical protein | - |
| SEEB0189_RS23060 (SEEB0189_000065) | 16146..19043 | - | 2898 | WP_020833550 | conjugal transfer mating-pair stabilization protein TraG | traG |
| SEEB0189_RS23065 (SEEB0189_000070) | 19045..20406 | - | 1362 | WP_020833551 | conjugal transfer pilus assembly protein TraH | traH |
| SEEB0189_RS23070 (SEEB0189_000075) | 20406..21017 | - | 612 | WP_020833552 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| SEEB0189_RS23075 (SEEB0189_000080) | 21039..21818 | - | 780 | WP_004558353 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| SEEB0189_RS23080 (SEEB0189_000085) | 21815..23668 | - | 1854 | WP_020833553 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| SEEB0189_RS23085 (SEEB0189_000090) | 23665..24279 | - | 615 | WP_020833554 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| SEEB0189_RS23090 (SEEB0189_000095) | 24276..24644 | - | 369 | WP_020833555 | hypothetical protein | - |
| SEEB0189_RS23095 (SEEB0189_000100) | 24655..25650 | - | 996 | WP_004558357 | conjugal transfer pilus assembly protein TraU | traU |
| SEEB0189_RS23100 (SEEB0189_000105) | 25647..26282 | - | 636 | WP_000715590 | type-F conjugative transfer system protein TraW | traW |
| SEEB0189_RS23105 (SEEB0189_000110) | 26282..26746 | - | 465 | WP_024143549 | type-F conjugative transfer system protein TrbI | - |
| SEEB0189_RS23110 (SEEB0189_000115) | 26743..29334 | - | 2592 | WP_001808381 | type IV secretion system protein TraC | virb4 |
| SEEB0189_RS23115 (SEEB0189_000120) | 29345..29959 | - | 615 | WP_020833557 | type IV conjugative transfer system lipoprotein TraV | traV |
| SEEB0189_RS23120 (SEEB0189_000125) | 29977..30429 | - | 453 | WP_020833558 | hypothetical protein | - |
| SEEB0189_RS23125 (SEEB0189_000130) | 30433..30657 | - | 225 | WP_008455352 | TraR/DksA C4-type zinc finger protein | - |
| SEEB0189_RS23130 (SEEB0189_000135) | 30768..32129 | - | 1362 | WP_000024509 | F-type conjugal transfer pilus assembly protein TraB | traB |
| SEEB0189_RS23135 (SEEB0189_000140) | 32116..32856 | - | 741 | WP_020833560 | type-F conjugative transfer system secretin TraK | traK |
| SEEB0189_RS23140 (SEEB0189_000145) | 32846..33409 | - | 564 | WP_001535119 | type IV conjugative transfer system protein TraE | traE |
| SEEB0189_RS23145 (SEEB0189_000150) | 33429..33734 | - | 306 | WP_000398849 | type IV conjugative transfer system protein TraL | traL |
| SEEB0189_RS23150 (SEEB0189_000155) | 33736..34095 | - | 360 | WP_001054221 | type IV conjugative transfer system pilin TraA | - |
| SEEB0189_RS23155 (SEEB0189_000160) | 34212..34445 | - | 234 | WP_000662610 | TraY domain-containing protein | - |
| SEEB0189_RS23160 (SEEB0189_000165) | 34651..35100 | - | 450 | WP_020833561 | helix-turn-helix domain-containing protein | - |
| SEEB0189_RS23165 (SEEB0189_000170) | 35397..35777 | - | 381 | WP_020833562 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| SEEB0189_RS23170 (SEEB0189_000175) | 36246..36701 | + | 456 | WP_020833563 | transglycosylase SLT domain-containing protein | virB1 |
| SEEB0189_RS23175 (SEEB0189_000180) | 36712..37242 | - | 531 | WP_000556935 | antirestriction protein | - |
| SEEB0189_RS23180 (SEEB0189_000185) | 37889..38713 | - | 825 | WP_020833564 | N-6 DNA methylase | - |
| SEEB0189_RS23185 (SEEB0189_000190) | 38760..38906 | - | 147 | WP_001159046 | hypothetical protein | - |
| SEEB0189_RS23190 (SEEB0189_000195) | 39001..39348 | - | 348 | WP_000550116 | hypothetical protein | - |
| SEEB0189_RS23195 (SEEB0189_000200) | 39405..39809 | - | 405 | WP_020833565 | hypothetical protein | - |
| SEEB0189_RS23200 (SEEB0189_000205) | 40535..40909 | - | 375 | WP_020833566 | hypothetical protein | - |
| SEEB0189_RS23205 (SEEB0189_000210) | 41264..41617 | - | 354 | WP_020833567 | hypothetical protein | - |