T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 42977..72956
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JN237_RS25510 (JN237_25510) | 42977..45289 | - | 2313 | WP_013214038 | type IV conjugative transfer system coupling protein TraD | virb4 |
| JN237_RS25515 (JN237_25515) | 45416..46105 | - | 690 | WP_014343485 | hypothetical protein | - |
| JN237_RS25520 (JN237_25520) | 46298..47029 | - | 732 | WP_013214036 | conjugal transfer complement resistance protein TraT | - |
| JN237_RS25525 (JN237_25525) | 47281..47883 | - | 603 | WP_013214035 | conjugal transfer protein TraS | - |
| JN237_RS25530 (JN237_25530) | 47906..50728 | - | 2823 | WP_013214034 | conjugal transfer mating-pair stabilization protein TraG | traG |
| JN237_RS25535 (JN237_25535) | 50728..52107 | - | 1380 | WP_074160414 | conjugal transfer pilus assembly protein TraH | traH |
| JN237_RS25540 (JN237_25540) | 52085..52528 | - | 444 | WP_013214032 | F-type conjugal transfer protein TrbF | - |
| JN237_RS25545 (JN237_25545) | 52574..53131 | - | 558 | WP_013214031 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| JN237_RS25550 (JN237_25550) | 53103..53342 | - | 240 | WP_004144400 | type-F conjugative transfer system pilin chaperone TraQ | - |
| JN237_RS25555 (JN237_25555) | 53353..54105 | - | 753 | WP_004152677 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| JN237_RS25560 (JN237_25560) | 54126..54452 | - | 327 | WP_013214030 | hypothetical protein | - |
| JN237_RS25565 (JN237_25565) | 54465..54713 | - | 249 | WP_013214029 | hypothetical protein | - |
| JN237_RS25570 (JN237_25570) | 54691..54945 | - | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| JN237_RS25575 (JN237_25575) | 54977..56932 | - | 1956 | WP_032448279 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| JN237_RS25580 (JN237_25580) | 56991..57638 | - | 648 | WP_015632510 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| JN237_RS25585 (JN237_25585) | 57914..58903 | - | 990 | WP_032439620 | conjugal transfer pilus assembly protein TraU | traU |
| JN237_RS25590 (JN237_25590) | 58900..59301 | - | 402 | WP_016831047 | hypothetical protein | - |
| JN237_RS25595 (JN237_25595) | 59336..59971 | - | 636 | WP_020325113 | type-F conjugative transfer system protein TraW | traW |
| JN237_RS25600 (JN237_25600) | 59971..60360 | - | 390 | WP_004167468 | type-F conjugative transfer system protein TrbI | - |
| JN237_RS25605 (JN237_25605) | 60360..62999 | - | 2640 | WP_032448278 | type IV secretion system protein TraC | virb4 |
| JN237_RS25610 (JN237_25610) | 63071..63469 | - | 399 | WP_023158008 | hypothetical protein | - |
| JN237_RS25615 (JN237_25615) | 63477..63866 | - | 390 | WP_065799586 | hypothetical protein | - |
| JN237_RS25620 (JN237_25620) | 63909..64313 | - | 405 | WP_016831042 | hypothetical protein | - |
| JN237_RS25625 (JN237_25625) | 64380..64692 | - | 313 | Protein_65 | hypothetical protein | - |
| JN237_RS25630 (JN237_25630) | 64693..64911 | - | 219 | WP_014386199 | hypothetical protein | - |
| JN237_RS25635 (JN237_25635) | 64871..65185 | - | 315 | WP_032448277 | hypothetical protein | - |
| JN237_RS25640 (JN237_25640) | 65190..65600 | - | 411 | WP_014386197 | hypothetical protein | - |
| JN237_RS25645 (JN237_25645) | 65731..66315 | - | 585 | WP_014386196 | type IV conjugative transfer system lipoprotein TraV | traV |
| JN237_RS25650 (JN237_25650) | 66362..66934 | - | 573 | WP_014386195 | conjugal transfer pilus-stabilizing protein TraP | - |
| JN237_RS25655 (JN237_25655) | 66927..68351 | - | 1425 | WP_014386194 | F-type conjugal transfer pilus assembly protein TraB | traB |
| JN237_RS25660 (JN237_25660) | 68351..69091 | - | 741 | WP_014386193 | type-F conjugative transfer system secretin TraK | traK |
| JN237_RS25665 (JN237_25665) | 69078..69644 | - | 567 | WP_004152602 | type IV conjugative transfer system protein TraE | traE |
| JN237_RS25670 (JN237_25670) | 69664..69969 | - | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| JN237_RS25675 (JN237_25675) | 69983..70351 | - | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| JN237_RS25680 (JN237_25680) | 70413..70619 | - | 207 | WP_171773970 | TraY domain-containing protein | - |
| JN237_RS25685 (JN237_25685) | 70752..71471 | - | 720 | WP_014386192 | conjugal transfer protein | - |
| JN237_RS25690 (JN237_25690) | 71664..72080 | - | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| JN237_RS25695 (JN237_25695) | 72471..72956 | + | 486 | WP_004178063 | transglycosylase SLT domain-containing protein | virB1 |
| JN237_RS25700 (JN237_25700) | 72989..73318 | - | 330 | WP_014386191 | DUF5983 family protein | - |
| JN237_RS25705 (JN237_25705) | 73351..74172 | - | 822 | WP_004182076 | DUF932 domain-containing protein | - |
| JN237_RS25710 (JN237_25710) | 75005..75418 | - | 414 | WP_013023817 | helix-turn-helix domain-containing protein | - |
| JN237_RS25715 (JN237_25715) | 75419..75697 | - | 279 | WP_004152721 | helix-turn-helix transcriptional regulator | - |
| JN237_RS25720 (JN237_25720) | 75687..76007 | - | 321 | WP_004152720 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| JN237_RS25725 (JN237_25725) | 76088..76312 | - | 225 | WP_014386189 | hypothetical protein | - |
| JN237_RS25730 (JN237_25730) | 76323..76535 | - | 213 | WP_014386188 | hypothetical protein | - |
| JN237_RS25735 (JN237_25735) | 76597..76923 | - | 327 | WP_014386187 | hypothetical protein | - |