T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 9184..35540
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFQ58_RS23820 (HFQ58_23850) | 4340..6337 | + | 1998 | WP_000117513 | ParB/RepB/Spo0J family partition protein | - |
| HFQ58_RS23825 (HFQ58_23855) | 6377..6811 | + | 435 | WP_010999943 | conjugation system SOS inhibitor PsiB | - |
| HFQ58_RS23830 (HFQ58_23860) | 6808..7545 | + | 738 | WP_000581933 | plasmid SOS inhibition protein A | - |
| HFQ58_RS24620 | 7580..7708 | + | 129 | WP_000372429 | hypothetical protein | - |
| HFQ58_RS23835 (HFQ58_23865) | 7794..7952 | + | 159 | WP_001704449 | hypothetical protein | - |
| HFQ58_RS23840 (HFQ58_23870) | 8055..8873 | + | 819 | Protein_11 | DUF932 domain-containing protein | - |
| HFQ58_RS23845 (HFQ58_23875) | 9184..9654 | - | 471 | WP_001526856 | transglycosylase SLT domain-containing protein | virB1 |
| HFQ58_RS23850 (HFQ58_23880) | 10069..10449 | + | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HFQ58_RS23855 (HFQ58_23885) | 10642..11328 | + | 687 | WP_000336297 | PAS domain-containing protein | - |
| HFQ58_RS23860 (HFQ58_23890) | 11422..11649 | + | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| HFQ58_RS23865 (HFQ58_23895) | 11691..12053 | + | 363 | WP_001274201 | type IV conjugative transfer system pilin TraA | - |
| HFQ58_RS23870 (HFQ58_23900) | 12068..12379 | + | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| HFQ58_RS23875 (HFQ58_23905) | 12401..12967 | + | 567 | WP_000399768 | type IV conjugative transfer system protein TraE | traE |
| HFQ58_RS23880 (HFQ58_23910) | 12954..13694 | + | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| HFQ58_RS23885 (HFQ58_23915) | 13694..15115 | + | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HFQ58_RS23890 (HFQ58_23920) | 15105..15701 | + | 597 | WP_000527896 | conjugal transfer pilus-stabilizing protein TraP | - |
| HFQ58_RS23895 (HFQ58_23925) | 15679..15924 | + | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| HFQ58_RS23900 (HFQ58_23930) | 15921..16436 | + | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| HFQ58_RS23905 (HFQ58_23935) | 16571..16792 | + | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| HFQ58_RS23910 (HFQ58_23940) | 16785..17252 | + | 468 | WP_000549562 | hypothetical protein | - |
| HFQ58_RS23915 (HFQ58_23945) | 17369..17632 | + | 264 | WP_001239255 | hypothetical protein | - |
| HFQ58_RS23920 (HFQ58_23950) | 17648..20296 | + | 2649 | WP_000793310 | type IV secretion system protein TraC | virb4 |
| HFQ58_RS23925 (HFQ58_23955) | 20271..20657 | + | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| HFQ58_RS23930 (HFQ58_23960) | 20654..21286 | + | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
| HFQ58_RS23935 (HFQ58_23965) | 21283..22275 | + | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| HFQ58_RS23940 (HFQ58_23970) | 22294..22602 | + | 309 | WP_010999945 | hypothetical protein | - |
| HFQ58_RS23945 (HFQ58_23975) | 22587..23225 | + | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HFQ58_RS23950 (HFQ58_23980) | 23262..23681 | + | 420 | WP_001229397 | HNH endonuclease signature motif containing protein | - |
| HFQ58_RS23955 (HFQ58_23985) | 23678..25504 | + | 1827 | WP_000827528 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HFQ58_RS23960 (HFQ58_23990) | 25515..25730 | + | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| HFQ58_RS23965 (HFQ58_23995) | 25742..26491 | + | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HFQ58_RS23970 (HFQ58_24000) | 26705..26998 | + | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HFQ58_RS23975 (HFQ58_24005) | 26985..27533 | + | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HFQ58_RS23980 (HFQ58_24010) | 27523..28905 | + | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| HFQ58_RS23985 (HFQ58_24015) | 28902..31724 | + | 2823 | WP_001007086 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HFQ58_RS23990 (HFQ58_24020) | 31740..32234 | + | 495 | WP_010999946 | entry exclusion protein | - |
| HFQ58_RS23995 (HFQ58_24025) | 32270..33001 | + | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| HFQ58_RS24000 (HFQ58_24030) | 33378..35540 | + | 2163 | WP_000009318 | type IV conjugative transfer system coupling protein TraD | virb4 |
| HFQ58_RS24005 (HFQ58_24035) | 35549..35947 | - | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| HFQ58_RS24010 (HFQ58_24040) | 35947..36174 | - | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |