T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 16793..56501
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFQ58_RS23310 (HFQ58_23335) | 14509..16800 | - | 2292 | WP_001289271 | F-type conjugative transfer protein TrbC | - |
| HFQ58_RS23315 (HFQ58_23340) | 16793..17863 | - | 1071 | WP_000151575 | IncI1-type conjugal transfer protein TrbB | trbB |
| HFQ58_RS23320 (HFQ58_23345) | 17882..19090 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| HFQ58_RS23325 (HFQ58_23350) | 19382..19534 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| HFQ58_RS23330 (HFQ58_23355) | 19606..19857 | - | 252 | WP_001291965 | hypothetical protein | - |
| HFQ58_RS23335 (HFQ58_23360) | 20218..21000 | - | 783 | WP_077769233 | IS21-like element IS100kyp family helper ATPase IstB | - |
| HFQ58_RS23340 (HFQ58_23365) | 20997..22019 | - | 1023 | WP_001572805 | IS21-like element IS100 family transposase | - |
| HFQ58_RS23345 (HFQ58_23370) | 22740..22916 | - | 177 | WP_001054900 | hypothetical protein | - |
| HFQ58_RS23350 (HFQ58_23375) | 23308..23517 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| HFQ58_RS23355 (HFQ58_23380) | 23589..24251 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HFQ58_RS23360 (HFQ58_23385) | 24322..26490 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| HFQ58_RS23365 (HFQ58_23390) | 26587..27171 | - | 585 | WP_001037998 | conjugal transfer protein TraX | - |
| HFQ58_RS23370 (HFQ58_23395) | 27200..28402 | - | 1203 | WP_001189158 | IncI1-type conjugal transfer protein TraW | traW |
| HFQ58_RS23375 (HFQ58_23400) | 28369..28983 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| HFQ58_RS23380 (HFQ58_23405) | 28983..32027 | - | 3045 | WP_001024751 | IncI1-type conjugal transfer protein TraU | traU |
| HFQ58_RS23385 (HFQ58_23410) | 32117..32917 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| HFQ58_RS23390 (HFQ58_23415) | 32901..33089 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| HFQ58_RS23395 (HFQ58_23420) | 33153..33557 | - | 405 | WP_000086960 | IncI1-type conjugal transfer protein TraR | traR |
| HFQ58_RS23400 (HFQ58_23425) | 33608..34135 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| HFQ58_RS23405 (HFQ58_23430) | 34135..34839 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| HFQ58_RS23410 (HFQ58_23435) | 34839..36128 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| HFQ58_RS23415 (HFQ58_23440) | 36131..37114 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| HFQ58_RS23420 (HFQ58_23445) | 37125..37817 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| HFQ58_RS23425 (HFQ58_23450) | 37814..38161 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| HFQ58_RS23430 (HFQ58_23455) | 38179..41946 | - | 3768 | WP_001141535 | LPD7 domain-containing protein | - |
| HFQ58_RS23435 (HFQ58_23460) | 42036..42587 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| HFQ58_RS23440 (HFQ58_23465) | 42602..42892 | - | 291 | WP_001299214 | hypothetical protein | traK |
| HFQ58_RS23445 (HFQ58_23470) | 42889..44037 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| HFQ58_RS23450 (HFQ58_23475) | 44034..44852 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| HFQ58_RS23455 (HFQ58_23480) | 44849..45307 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HFQ58_RS23460 (HFQ58_23485) | 45702..46286 | - | 585 | WP_000977517 | histidine phosphatase family protein | - |
| HFQ58_RS23465 (HFQ58_23490) | 46346..47548 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| HFQ58_RS23470 (HFQ58_23495) | 47634..48458 | - | 825 | WP_001238927 | conjugal transfer protein TraE | traE |
| HFQ58_RS23475 (HFQ58_23500) | 48609..49763 | - | 1155 | WP_001139958 | site-specific integrase | - |
| HFQ58_RS24710 | 50338..50559 | + | 222 | Protein_50 | prepilin | - |
| HFQ58_RS23485 (HFQ58_23505) | 50703..51995 | - | 1293 | WP_032274560 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HFQ58_RS23490 (HFQ58_23510) | 51995..52651 | - | 657 | WP_001193553 | prepilin peptidase | - |
| HFQ58_RS23495 (HFQ58_23515) | 52636..53196 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| HFQ58_RS23500 (HFQ58_23520) | 53206..53820 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| HFQ58_RS23505 (HFQ58_23525) | 53838..54935 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| HFQ58_RS23510 (HFQ58_23530) | 54948..56501 | - | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HFQ58_RS23515 (HFQ58_23535) | 56512..56964 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| HFQ58_RS23520 (HFQ58_23540) | 56951..58246 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| HFQ58_RS23525 (HFQ58_23545) | 58239..59921 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| HFQ58_RS23530 (HFQ58_23550) | 59935..60372 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| HFQ58_RS23535 (HFQ58_23555) | 60372..61439 | - | 1068 | WP_000742600 | type IV pilus biogenesis lipoprotein PilL | - |