T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 38186..47276
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFQ94_RS22895 (HFQ94_22915) | 34217..34450 | - | 234 | WP_001191890 | hypothetical protein | - |
| HFQ94_RS22900 (HFQ94_22920) | 34432..35049 | - | 618 | WP_001249395 | hypothetical protein | - |
| HFQ94_RS22905 (HFQ94_22925) | 35217..38189 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| HFQ94_RS22910 (HFQ94_22930) | 38186..40051 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HFQ94_RS22915 (HFQ94_22935) | 40101..40646 | + | 546 | WP_000228720 | hypothetical protein | - |
| HFQ94_RS22920 (HFQ94_22940) | 40603..41232 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HFQ94_RS22925 (HFQ94_22945) | 41242..41688 | + | 447 | WP_000122507 | hypothetical protein | - |
| HFQ94_RS22930 (HFQ94_22950) | 41698..42075 | + | 378 | WP_000869297 | hypothetical protein | - |
| HFQ94_RS22935 (HFQ94_22955) | 42075..42737 | + | 663 | WP_001231464 | hypothetical protein | - |
| HFQ94_RS22940 (HFQ94_22960) | 43073..43438 | + | 366 | WP_001052530 | hypothetical protein | - |
| HFQ94_RS22945 (HFQ94_22965) | 43583..43864 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HFQ94_RS22950 (HFQ94_22970) | 43861..44487 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HFQ94_RS22955 (HFQ94_22975) | 44471..45388 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HFQ94_RS22960 (HFQ94_22980) | 45388..46701 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HFQ94_RS22965 (HFQ94_22985) | 46698..47276 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HFQ94_RS22970 (HFQ94_22990) | 47280..47672 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HFQ94_RS22975 (HFQ94_22995) | 47957..49219 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HFQ94_RS22980 (HFQ94_23000) | 49543..50688 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| HFQ94_RS22985 (HFQ94_23005) | 50782..51315 | + | 534 | WP_001221666 | lipocalin family protein | - |
| HFQ94_RS22990 (HFQ94_23010) | 51312..51629 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HFQ94_RS23875 (HFQ94_23015) | 51886..52251 | + | 366 | Protein_69 | LuxR family transcriptional regulator | - |