T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 105601..114691
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFU35_RS24405 (HFU35_24445) | 101632..101865 | - | 234 | WP_001191890 | hypothetical protein | - |
| HFU35_RS24410 (HFU35_24450) | 101847..102464 | - | 618 | WP_001249395 | hypothetical protein | - |
| HFU35_RS24415 (HFU35_24455) | 102632..105604 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| HFU35_RS24420 (HFU35_24460) | 105601..107466 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HFU35_RS24425 (HFU35_24465) | 107516..108061 | + | 546 | WP_000228720 | hypothetical protein | - |
| HFU35_RS24430 (HFU35_24470) | 108018..108647 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HFU35_RS24435 (HFU35_24475) | 108657..109103 | + | 447 | WP_000122507 | hypothetical protein | - |
| HFU35_RS24440 (HFU35_24480) | 109113..109490 | + | 378 | WP_000869297 | hypothetical protein | - |
| HFU35_RS24445 (HFU35_24485) | 109490..110152 | + | 663 | WP_001231464 | hypothetical protein | - |
| HFU35_RS24450 (HFU35_24490) | 110488..110853 | + | 366 | WP_001052530 | hypothetical protein | - |
| HFU35_RS24455 (HFU35_24495) | 110998..111279 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HFU35_RS24460 (HFU35_24500) | 111276..111902 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HFU35_RS24465 (HFU35_24505) | 111886..112803 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HFU35_RS24470 (HFU35_24510) | 112803..114116 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HFU35_RS24475 (HFU35_24515) | 114113..114691 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HFU35_RS24480 (HFU35_24520) | 114695..115087 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HFU35_RS24485 (HFU35_24525) | 115372..116634 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HFU35_RS24490 (HFU35_24530) | 116958..118103 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| HFU35_RS24495 (HFU35_24535) | 118197..118730 | + | 534 | WP_001221666 | lipocalin family protein | - |
| HFU35_RS24500 (HFU35_24540) | 118727..119044 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HFU35_RS25345 (HFU35_24545) | 119301..119666 | + | 366 | Protein_143 | LuxR family transcriptional regulator | - |