T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 99119..108209
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFQ25_RS25175 (HFQ25_24150) | 94144..94509 | - | 366 | Protein_101 | LuxR family transcriptional regulator | - |
| HFQ25_RS24140 (HFQ25_24155) | 94766..95083 | + | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HFQ25_RS24145 (HFQ25_24160) | 95080..95613 | - | 534 | WP_001221666 | lipocalin family protein | - |
| HFQ25_RS24150 (HFQ25_24165) | 95707..96852 | - | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| HFQ25_RS24155 (HFQ25_24170) | 97176..98438 | - | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HFQ25_RS24160 (HFQ25_24175) | 98723..99115 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HFQ25_RS24165 (HFQ25_24180) | 99119..99697 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HFQ25_RS24170 (HFQ25_24185) | 99694..101007 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HFQ25_RS24175 (HFQ25_24190) | 101007..101924 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HFQ25_RS24180 (HFQ25_24195) | 101908..102534 | - | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HFQ25_RS24185 (HFQ25_24200) | 102531..102812 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HFQ25_RS24190 (HFQ25_24205) | 102957..103322 | - | 366 | WP_001052530 | hypothetical protein | - |
| HFQ25_RS24195 (HFQ25_24210) | 103658..104320 | - | 663 | WP_001231464 | hypothetical protein | - |
| HFQ25_RS24200 (HFQ25_24215) | 104320..104697 | - | 378 | WP_000869297 | hypothetical protein | - |
| HFQ25_RS24205 (HFQ25_24220) | 104707..105153 | - | 447 | WP_000122507 | hypothetical protein | - |
| HFQ25_RS24210 (HFQ25_24225) | 105163..105792 | - | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HFQ25_RS24215 (HFQ25_24230) | 105749..106294 | - | 546 | WP_000228720 | hypothetical protein | - |
| HFQ25_RS24220 (HFQ25_24235) | 106344..108209 | - | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HFQ25_RS24225 (HFQ25_24240) | 108206..111178 | - | 2973 | WP_001326173 | MobH family relaxase | - |
| HFQ25_RS24230 (HFQ25_24245) | 111346..111963 | + | 618 | WP_001249395 | hypothetical protein | - |
| HFQ25_RS24235 (HFQ25_24250) | 111945..112178 | + | 234 | WP_001191890 | hypothetical protein | - |