T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 100590..111910
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFR97_RS24170 (HFR97_24215) | 96621..96854 | - | 234 | WP_001191890 | hypothetical protein | - |
| HFR97_RS24175 (HFR97_24220) | 96836..97453 | - | 618 | WP_001249395 | hypothetical protein | - |
| HFR97_RS24180 (HFR97_24225) | 97621..100593 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| HFR97_RS24185 (HFR97_24230) | 100590..102455 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HFR97_RS24190 (HFR97_24235) | 102505..103050 | + | 546 | WP_000228720 | hypothetical protein | - |
| HFR97_RS24195 (HFR97_24240) | 103007..103636 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HFR97_RS24200 (HFR97_24245) | 103646..104092 | + | 447 | WP_000122507 | hypothetical protein | - |
| HFR97_RS24205 (HFR97_24250) | 104102..104479 | + | 378 | WP_000869297 | hypothetical protein | - |
| HFR97_RS24210 (HFR97_24255) | 104479..105141 | + | 663 | WP_001231464 | hypothetical protein | - |
| HFR97_RS24215 (HFR97_24260) | 105477..105842 | + | 366 | WP_001052530 | hypothetical protein | - |
| HFR97_RS24220 (HFR97_24265) | 105987..106268 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HFR97_RS24225 (HFR97_24270) | 106265..106891 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HFR97_RS24230 (HFR97_24275) | 106875..107792 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HFR97_RS24235 (HFR97_24280) | 107792..109105 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HFR97_RS24240 (HFR97_24285) | 109102..109680 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HFR97_RS24245 (HFR97_24290) | 109684..110076 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HFR97_RS24250 (HFR97_24295) | 110361..111320 | + | 960 | Protein_142 | IS1380-like element ISEcp1 family transposase | - |
| HFR97_RS24255 (HFR97_24300) | 111314..112021 | - | 708 | WP_000637385 | conjugal transfer protein TraC | - |
| HFR97_RS24260 (HFR97_24305) | 112018..112725 | - | 708 | WP_001259346 | DsbC family protein | - |