T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 12988..24308
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFS12_RS22520 (HFS12_22540) | 12173..12880 | + | 708 | WP_001259346 | DsbC family protein | - |
| HFS12_RS22525 (HFS12_22545) | 12988..13584 | + | 597 | WP_232166453 | conjugal transfer protein TraC | virb4 |
| HFS12_RS22530 (HFS12_22550) | 13578..14537 | - | 960 | Protein_11 | IS1380-like element ISEcp1 family transposase | - |
| HFS12_RS22535 (HFS12_22555) | 14822..15214 | - | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HFS12_RS22540 (HFS12_22560) | 15218..15796 | - | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HFS12_RS22545 (HFS12_22565) | 15793..17106 | - | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HFS12_RS22550 (HFS12_22570) | 17106..18023 | - | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HFS12_RS22555 (HFS12_22575) | 18007..18633 | - | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HFS12_RS22560 (HFS12_22580) | 18630..18911 | - | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HFS12_RS22565 (HFS12_22585) | 19056..19421 | - | 366 | WP_001052530 | hypothetical protein | - |
| HFS12_RS22570 (HFS12_22590) | 19757..20419 | - | 663 | WP_001231464 | hypothetical protein | - |
| HFS12_RS22575 (HFS12_22595) | 20419..20796 | - | 378 | WP_000869297 | hypothetical protein | - |
| HFS12_RS22580 (HFS12_22600) | 20806..21252 | - | 447 | WP_000122507 | hypothetical protein | - |
| HFS12_RS22585 (HFS12_22605) | 21262..21891 | - | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HFS12_RS22590 (HFS12_22610) | 21848..22393 | - | 546 | WP_000228720 | hypothetical protein | - |
| HFS12_RS22595 (HFS12_22615) | 22443..24308 | - | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HFS12_RS22600 (HFS12_22620) | 24305..27277 | - | 2973 | WP_001326173 | MobH family relaxase | - |
| HFS12_RS22605 (HFS12_22625) | 27445..28062 | + | 618 | WP_001249395 | hypothetical protein | - |
| HFS12_RS22610 (HFS12_22630) | 28044..28277 | + | 234 | WP_001191890 | hypothetical protein | - |