T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 16006..56932
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFQ45_RS23150 (HFQ45_23155) | 13722..16013 | - | 2292 | WP_001289271 | F-type conjugative transfer protein TrbC | - |
| HFQ45_RS23155 (HFQ45_23160) | 16006..17076 | - | 1071 | WP_000151575 | IncI1-type conjugal transfer protein TrbB | trbB |
| HFQ45_RS23160 (HFQ45_23165) | 17095..18303 | - | 1209 | WP_000121273 | IncI1-type conjugal transfer protein TrbA | trbA |
| HFQ45_RS23165 (HFQ45_23170) | 18595..18747 | + | 153 | WP_001303307 | Hok/Gef family protein | - |
| HFQ45_RS23170 (HFQ45_23175) | 18819..19070 | - | 252 | WP_001291965 | hypothetical protein | - |
| HFQ45_RS23175 (HFQ45_23180) | 19431..20213 | - | 783 | WP_001300609 | IS21-like element IS100kyp family helper ATPase IstB | - |
| HFQ45_RS23180 (HFQ45_23185) | 20210..21232 | - | 1023 | WP_001572805 | IS21-like element IS100 family transposase | - |
| HFQ45_RS23185 (HFQ45_23190) | 21953..22129 | - | 177 | WP_001054900 | hypothetical protein | - |
| HFQ45_RS23190 (HFQ45_23195) | 22521..22730 | + | 210 | WP_000062603 | HEAT repeat domain-containing protein | - |
| HFQ45_RS23195 (HFQ45_23200) | 22802..23464 | - | 663 | WP_000644794 | plasmid IncI1-type surface exclusion protein ExcA | - |
| HFQ45_RS23200 (HFQ45_23205) | 23535..25703 | - | 2169 | WP_000698368 | DotA/TraY family protein | traY |
| HFQ45_RS23205 (HFQ45_23210) | 25800..26384 | - | 585 | WP_001037998 | conjugal transfer protein TraX | - |
| HFQ45_RS23210 (HFQ45_23215) | 26413..27615 | - | 1203 | WP_001189158 | IncI1-type conjugal transfer protein TraW | traW |
| HFQ45_RS23215 (HFQ45_23220) | 27582..28196 | - | 615 | WP_000337394 | IncI1-type conjugal transfer protein TraV | traV |
| HFQ45_RS23220 (HFQ45_23225) | 28196..31240 | - | 3045 | WP_052869827 | IncI1-type conjugal transfer protein TraU | traU |
| HFQ45_RS23225 (HFQ45_23230) | 31330..32130 | - | 801 | WP_001164788 | IncI1-type conjugal transfer protein TraT | traT |
| HFQ45_RS23230 (HFQ45_23235) | 32114..32302 | - | 189 | WP_001277255 | putative conjugal transfer protein TraS | - |
| HFQ45_RS23235 (HFQ45_23240) | 32366..32770 | - | 405 | WP_000086957 | IncI1-type conjugal transfer protein TraR | traR |
| HFQ45_RS23240 (HFQ45_23245) | 32821..33348 | - | 528 | WP_001055569 | conjugal transfer protein TraQ | traQ |
| HFQ45_RS23245 (HFQ45_23250) | 33348..34052 | - | 705 | WP_000801920 | IncI1-type conjugal transfer protein TraP | traP |
| HFQ45_RS23250 (HFQ45_23255) | 34052..35341 | - | 1290 | WP_001271997 | conjugal transfer protein TraO | traO |
| HFQ45_RS23255 (HFQ45_23260) | 35344..36327 | - | 984 | WP_001191878 | IncI1-type conjugal transfer protein TraN | traN |
| HFQ45_RS23260 (HFQ45_23265) | 36338..37030 | - | 693 | WP_000138552 | DotI/IcmL family type IV secretion protein | traM |
| HFQ45_RS23265 (HFQ45_23270) | 37027..37374 | - | 348 | WP_001055900 | conjugal transfer protein | traL |
| HFQ45_RS23270 (HFQ45_23275) | 37392..41159 | - | 3768 | WP_001141535 | LPD7 domain-containing protein | - |
| HFQ45_RS23275 (HFQ45_23280) | 41249..41800 | - | 552 | WP_000014584 | phospholipase D family protein | - |
| HFQ45_RS23280 (HFQ45_23285) | 41815..42105 | - | 291 | WP_001299214 | hypothetical protein | traK |
| HFQ45_RS23285 (HFQ45_23290) | 42102..43250 | - | 1149 | WP_001024972 | plasmid transfer ATPase TraJ | virB11 |
| HFQ45_RS23290 (HFQ45_23295) | 43247..44065 | - | 819 | WP_000646097 | IncI1-type conjugal transfer lipoprotein TraI | traI |
| HFQ45_RS23295 (HFQ45_23300) | 44062..44520 | - | 459 | WP_001079808 | IncI1-type conjugal transfer lipoprotein TraH | - |
| HFQ45_RS23300 (HFQ45_23305) | 44915..45499 | - | 585 | WP_000977517 | histidine phosphatase family protein | - |
| HFQ45_RS23305 (HFQ45_23310) | 45559..46761 | - | 1203 | WP_000976353 | conjugal transfer protein TraF | - |
| HFQ45_RS23310 (HFQ45_23315) | 46847..47671 | - | 825 | WP_001238927 | conjugal transfer protein TraE | traE |
| HFQ45_RS23315 (HFQ45_23320) | 47822..48976 | - | 1155 | WP_001139958 | site-specific integrase | - |
| HFQ45_RS23320 (HFQ45_23325) | 49667..49915 | + | 249 | WP_001349157 | hypothetical protein | - |
| HFQ45_RS23325 (HFQ45_23330) | 49912..50196 | - | 285 | Protein_50 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HFQ45_RS24055 | 50784..51005 | + | 222 | Protein_51 | prepilin | - |
| HFQ45_RS23335 (HFQ45_23335) | 51002..52426 | - | 1425 | WP_023278060 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| HFQ45_RS23340 (HFQ45_23340) | 52426..53082 | - | 657 | WP_001193553 | prepilin peptidase | - |
| HFQ45_RS23345 (HFQ45_23345) | 53067..53627 | - | 561 | WP_000014116 | lytic transglycosylase domain-containing protein | virB1 |
| HFQ45_RS23350 (HFQ45_23350) | 53637..54251 | - | 615 | WP_000959785 | type 4 pilus major pilin | - |
| HFQ45_RS23355 (HFQ45_23355) | 54269..55366 | - | 1098 | WP_001208805 | type II secretion system F family protein | - |
| HFQ45_RS23360 (HFQ45_23360) | 55379..56932 | - | 1554 | WP_000362202 | ATPase, T2SS/T4P/T4SS family | virB11 |
| HFQ45_RS23365 (HFQ45_23365) | 56943..57395 | - | 453 | WP_001247336 | type IV pilus biogenesis protein PilP | - |
| HFQ45_RS23370 (HFQ45_23370) | 57382..58677 | - | 1296 | WP_000752774 | type 4b pilus protein PilO2 | - |
| HFQ45_RS23375 (HFQ45_23375) | 58670..60352 | - | 1683 | WP_000748143 | PilN family type IVB pilus formation outer membrane protein | - |
| HFQ45_RS23380 (HFQ45_23380) | 60366..60803 | - | 438 | WP_000539807 | type IV pilus biogenesis protein PilM | - |
| HFQ45_RS23385 (HFQ45_23385) | 60803..61870 | - | 1068 | WP_000742600 | type IV pilus biogenesis lipoprotein PilL | - |