T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 79548..88638
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HTA38_RS00505 | 75579..75812 | - | 234 | WP_001191890 | hypothetical protein | - |
| HTA38_RS00510 (D647_p34084) | 75794..76411 | - | 618 | WP_001249395 | hypothetical protein | - |
| HTA38_RS00515 (D647_p34085) | 76579..79551 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| HTA38_RS00520 (D647_p34086) | 79548..81413 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HTA38_RS00525 (D647_p34087) | 81424..82008 | + | 585 | WP_000332868 | hypothetical protein | - |
| HTA38_RS00530 (D647_p34088) | 81965..82594 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HTA38_RS00535 (D647_p34089) | 82604..83050 | + | 447 | WP_000122507 | hypothetical protein | - |
| HTA38_RS00540 (D647_p34090) | 83060..83437 | + | 378 | WP_000869297 | hypothetical protein | - |
| HTA38_RS00545 (D647_p34091) | 83437..84099 | + | 663 | WP_001231464 | hypothetical protein | - |
| HTA38_RS00550 | 84280..84423 | + | 144 | WP_001275801 | hypothetical protein | - |
| HTA38_RS00555 (D647_p34092) | 84435..84800 | + | 366 | WP_001052530 | hypothetical protein | - |
| HTA38_RS00560 | 84945..85226 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HTA38_RS00565 (D647_p34093) | 85223..85849 | + | 627 | WP_117082541 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HTA38_RS00570 (D647_p34094) | 85833..86750 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HTA38_RS00575 (D647_p34095) | 86750..88063 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HTA38_RS00580 (D647_p34096) | 88060..88638 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HTA38_RS00585 (D647_p34097) | 88642..89034 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HTA38_RS00590 (D647_p34098) | 89319..90581 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HTA38_RS00595 (D647_p34099) | 90905..92050 | + | 1146 | WP_014386387 | class C beta-lactamase CMY-16 | - |
| HTA38_RS00600 (D647_p34100) | 92144..92677 | + | 534 | WP_001221666 | lipocalin family protein | - |
| HTA38_RS00605 (D647_p34101) | 92674..92991 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HTA38_RS00610 (D647_p34102) | 93248..93613 | + | 366 | Protein_122 | LuxR family transcriptional regulator | - |