T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 133476..142566
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFS63_RS25505 (HFS63_25575) | 129507..129740 | - | 234 | WP_001191890 | hypothetical protein | - |
| HFS63_RS25510 (HFS63_25580) | 129722..130339 | - | 618 | WP_001249395 | hypothetical protein | - |
| HFS63_RS25515 (HFS63_25585) | 130507..133479 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| HFS63_RS25520 (HFS63_25590) | 133476..135341 | + | 1866 | WP_000178857 | conjugative transfer system coupling protein TraD | virb4 |
| HFS63_RS25525 (HFS63_25595) | 135391..135936 | + | 546 | WP_000228720 | hypothetical protein | - |
| HFS63_RS25530 (HFS63_25600) | 135893..136522 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HFS63_RS25535 (HFS63_25605) | 136532..136978 | + | 447 | WP_000122507 | hypothetical protein | - |
| HFS63_RS25540 (HFS63_25610) | 136988..137365 | + | 378 | WP_000869297 | hypothetical protein | - |
| HFS63_RS25545 (HFS63_25615) | 137365..138027 | + | 663 | WP_001231464 | hypothetical protein | - |
| HFS63_RS25550 (HFS63_25620) | 138208..138351 | + | 144 | WP_001275801 | hypothetical protein | - |
| HFS63_RS25555 (HFS63_25625) | 138363..138728 | + | 366 | WP_001052530 | hypothetical protein | - |
| HFS63_RS25560 (HFS63_25630) | 138873..139154 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HFS63_RS25565 (HFS63_25635) | 139151..139777 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HFS63_RS25570 (HFS63_25640) | 139761..140678 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HFS63_RS25575 (HFS63_25645) | 140678..141991 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HFS63_RS25580 (HFS63_25650) | 141988..142566 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HFS63_RS25585 (HFS63_25655) | 142570..142962 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HFS63_RS25590 (HFS63_25660) | 143247..144509 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HFS63_RS25595 (HFS63_25665) | 144833..145978 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| HFS63_RS25600 (HFS63_25670) | 146072..146605 | + | 534 | WP_001221666 | lipocalin family protein | - |
| HFS63_RS25605 (HFS63_25675) | 146602..146919 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HFS63_RS26625 (HFS63_25680) | 147176..147541 | + | 366 | Protein_183 | LuxR family transcriptional regulator | - |