T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 53000..62090
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HFU03_RS23615 (HFU03_23645) | 49031..49264 | - | 234 | WP_001191890 | hypothetical protein | - |
| HFU03_RS23620 (HFU03_23650) | 49246..49863 | - | 618 | WP_001249395 | hypothetical protein | - |
| HFU03_RS23625 (HFU03_23655) | 50031..53003 | + | 2973 | WP_001326173 | MobH family relaxase | - |
| HFU03_RS23630 (HFU03_23660) | 53000..54865 | + | 1866 | WP_077779971 | conjugative transfer system coupling protein TraD | virb4 |
| HFU03_RS23635 (HFU03_23665) | 54915..55460 | + | 546 | WP_000228720 | hypothetical protein | - |
| HFU03_RS23640 (HFU03_23670) | 55417..56046 | + | 630 | WP_000743449 | DUF4400 domain-containing protein | tfc7 |
| HFU03_RS23645 (HFU03_23675) | 56056..56502 | + | 447 | WP_000122507 | hypothetical protein | - |
| HFU03_RS23650 (HFU03_23680) | 56512..56889 | + | 378 | WP_000869297 | hypothetical protein | - |
| HFU03_RS23655 (HFU03_23685) | 56889..57551 | + | 663 | WP_001231464 | hypothetical protein | - |
| HFU03_RS23660 (HFU03_23690) | 57887..58252 | + | 366 | WP_001052530 | hypothetical protein | - |
| HFU03_RS23665 (HFU03_23695) | 58397..58678 | + | 282 | WP_000805625 | type IV conjugative transfer system protein TraL | traL |
| HFU03_RS23670 (HFU03_23700) | 58675..59301 | + | 627 | WP_001049717 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HFU03_RS23675 (HFU03_23705) | 59285..60202 | + | 918 | WP_000794249 | type-F conjugative transfer system secretin TraK | traK |
| HFU03_RS23680 (HFU03_23710) | 60202..61515 | + | 1314 | WP_024131605 | TraB/VirB10 family protein | traB |
| HFU03_RS23685 (HFU03_23715) | 61512..62090 | + | 579 | WP_000793435 | type IV conjugative transfer system lipoprotein TraV | traV |
| HFU03_RS23690 (HFU03_23720) | 62094..62486 | + | 393 | WP_000479535 | TraA family conjugative transfer protein | - |
| HFU03_RS23695 (HFU03_23725) | 62771..64033 | + | 1263 | WP_000608644 | IS1380-like element ISEcp1 family transposase | - |
| HFU03_RS23700 (HFU03_23730) | 64357..65502 | + | 1146 | WP_000976514 | extended-spectrum class C beta-lactamase CMY-2 | - |
| HFU03_RS23705 (HFU03_23735) | 65596..66129 | + | 534 | WP_001221666 | lipocalin family protein | - |
| HFU03_RS23710 (HFU03_23740) | 66126..66443 | - | 318 | WP_000118520 | quaternary ammonium compound efflux SMR transporter SugE | - |
| HFU03_RS24650 (HFU03_23745) | 66700..67065 | + | 366 | Protein_95 | LuxR family transcriptional regulator | - |