T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 23656..43498
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EGK38_RS23705 (EGK38_023755) | 19501..20934 | - | 1434 | WP_001288432 | DNA cytosine methyltransferase | - |
| EGK38_RS23710 (EGK38_023760) | 21033..21305 | + | 273 | Protein_24 | IS1 family transposase | - |
| EGK38_RS23715 (EGK38_023765) | 21316..21522 | - | 207 | WP_001749967 | hypothetical protein | - |
| EGK38_RS23720 (EGK38_023770) | 21527..22174 | - | 648 | WP_015344958 | restriction endonuclease | - |
| EGK38_RS23725 (EGK38_023775) | 22224..22535 | - | 312 | WP_001452736 | hypothetical protein | - |
| EGK38_RS23730 (EGK38_023780) | 22571..22885 | - | 315 | WP_001749965 | TrbM/KikA/MpfK family conjugal transfer protein | - |
| EGK38_RS23735 (EGK38_023785) | 22882..23226 | - | 345 | WP_001749964 | hypothetical protein | - |
| EGK38_RS23740 (EGK38_023790) | 23242..23613 | - | 372 | WP_011867773 | H-NS family nucleoid-associated regulatory protein | - |
| EGK38_RS23745 (EGK38_023795) | 23656..24390 | + | 735 | WP_001749963 | lytic transglycosylase domain-containing protein | virB1 |
| EGK38_RS23750 (EGK38_023800) | 24399..24680 | + | 282 | WP_000440698 | transcriptional repressor KorA | - |
| EGK38_RS23755 (EGK38_023805) | 24690..24983 | + | 294 | WP_001749962 | hypothetical protein | virB2 |
| EGK38_RS23760 (EGK38_023810) | 25033..25350 | + | 318 | WP_000496058 | VirB3 family type IV secretion system protein | virB3 |
| EGK38_RS23765 (EGK38_023815) | 25482..27950 | + | 2469 | WP_224743086 | VirB4 family type IV secretion/conjugal transfer ATPase | virb4 |
| EGK38_RS23770 (EGK38_023820) | 27968..28681 | + | 714 | WP_001749960 | type IV secretion system protein | virB5 |
| EGK38_RS23775 (EGK38_023825) | 28689..28916 | + | 228 | WP_001749959 | IncN-type entry exclusion lipoprotein EexN | - |
| EGK38_RS23780 (EGK38_023830) | 28932..29972 | + | 1041 | WP_001749958 | type IV secretion system protein | virB6 |
| EGK38_RS24305 (EGK38_023835) | 30073..30201 | + | 129 | WP_071882546 | conjugal transfer protein TraN | - |
| EGK38_RS23785 (EGK38_023840) | 30191..30889 | + | 699 | WP_000646594 | type IV secretion system protein | virB8 |
| EGK38_RS23790 (EGK38_023845) | 30900..31784 | + | 885 | WP_000735066 | TrbG/VirB9 family P-type conjugative transfer protein | virB9 |
| EGK38_RS23795 (EGK38_023850) | 31784..32944 | + | 1161 | WP_000101710 | type IV secretion system protein VirB10 | virB10 |
| EGK38_RS23800 (EGK38_023855) | 32986..33981 | + | 996 | WP_000128596 | ATPase, T2SS/T4P/T4SS family | virB11 |
| EGK38_RS23805 (EGK38_023860) | 33981..34514 | + | 534 | WP_000792636 | phospholipase D family protein | - |
| EGK38_RS24230 | 34688..35140 | - | 453 | WP_001749956 | DUF6710 family protein | - |
| EGK38_RS23815 (EGK38_023870) | 35451..35693 | + | 243 | WP_000844627 | transposase | - |
| EGK38_RS23820 (EGK38_023875) | 35725..36375 | - | 651 | WP_000164043 | tetracycline resistance transcriptional repressor TetR(A) | - |
| EGK38_RS23825 (EGK38_023880) | 36481..37680 | + | 1200 | WP_012579085 | tetracycline efflux MFS transporter Tet(A) | - |
| EGK38_RS23830 (EGK38_023885) | 37712..38365 | - | 654 | Protein_49 | EamA family transporter | - |
| EGK38_RS23835 (EGK38_023890) | 38560..38733 | - | 174 | WP_001749978 | hypothetical protein | - |
| EGK38_RS23840 (EGK38_023895) | 38733..41969 | - | 3237 | WP_060435336 | MobF family relaxase | - |
| EGK38_RS23845 (EGK38_023900) | 41969..43498 | - | 1530 | WP_001749976 | type IV secretion system DNA-binding domain-containing protein | virb4 |
| EGK38_RS23850 (EGK38_023905) | 43500..43916 | - | 417 | WP_001749975 | hypothetical protein | - |
| EGK38_RS24235 | 44407..44826 | + | 420 | WP_001749974 | plasmid stabilization protein StbA | - |
| EGK38_RS23860 (EGK38_023915) | 44835..45551 | + | 717 | WP_001749973 | StbB family protein | - |
| EGK38_RS23865 (EGK38_023920) | 45553..45921 | + | 369 | WP_001749972 | plasmid stabilization protein StbC | - |
| EGK38_RS23870 (EGK38_023925) | 46103..46447 | + | 345 | WP_000999874 | hypothetical protein | - |
| EGK38_RS23875 (EGK38_023930) | 46558..46878 | - | 321 | WP_001749971 | protein CcgAII | - |
| EGK38_RS23880 (EGK38_023935) | 46933..47112 | - | 180 | WP_000214483 | protein CcgAI | - |
| EGK38_RS23885 (EGK38_023940) | 47838..48347 | - | 510 | WP_000129958 | antirestriction protein ArdA | - |