T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 38496..77729
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| DBX29_RS17950 (DBX29_17950) | 33562..33669 | - | 108 | Protein_39 | aminoglycoside phosphotransferase family protein | - |
| DBX29_RS17955 (DBX29_17955) | 33669..34472 | - | 804 | WP_001082319 | aminoglycoside O-phosphotransferase APH(3'')-Ib | - |
| DBX29_RS17960 (DBX29_17960) | 34533..35348 | - | 816 | WP_001043260 | sulfonamide-resistant dihydropteroate synthase Sul2 | - |
| DBX29_RS17980 (DBX29_17980) | 36212..38515 | - | 2304 | WP_000077663 | F-type conjugative transfer protein TrbC | - |
| DBX29_RS17985 (DBX29_17985) | 38496..39620 | - | 1125 | WP_001557490 | DsbC family protein | trbB |
| DBX29_RS17990 (DBX29_17990) | 39617..40906 | - | 1290 | WP_000121916 | IncI1-type conjugal transfer protein TrbA | trbA |
| DBX29_RS26705 | 41244..41390 | + | 147 | WP_001346191 | hypothetical protein | - |
| DBX29_RS27370 | 41443..41538 | + | 96 | WP_001388983 | DinQ-like type I toxin DqlB | - |
| DBX29_RS27375 | 42127..42222 | + | 96 | WP_001388983 | DinQ-like type I toxin DqlB | - |
| DBX29_RS26710 | 42285..42461 | - | 177 | WP_001054907 | hypothetical protein | - |
| DBX29_RS18005 (DBX29_18005) | 42611..43078 | - | 468 | WP_000598962 | thermonuclease family protein | - |
| DBX29_RS18010 (DBX29_18010) | 43238..43861 | + | 624 | WP_001155250 | helix-turn-helix domain-containing protein | - |
| DBX29_RS18020 (DBX29_18020) | 44059..44274 | - | 216 | WP_000266543 | hypothetical protein | - |
| DBX29_RS18025 (DBX29_18025) | 44278..44646 | - | 369 | WP_001345852 | hypothetical protein | - |
| DBX29_RS18035 (DBX29_18035) | 44937..45179 | - | 243 | WP_000650923 | hypothetical protein | - |
| DBX29_RS18040 (DBX29_18040) | 45509..45661 | + | 153 | WP_001335079 | Hok/Gef family protein | - |
| DBX29_RS18045 (DBX29_18045) | 45799..47385 | - | 1587 | WP_000004564 | TnsA endonuclease N-terminal domain-containing protein | - |
| DBX29_RS18050 (DBX29_18050) | 47659..48306 | - | 648 | WP_015056434 | plasmid IncI1-type surface exclusion protein ExcA | - |
| DBX29_RS18055 (DBX29_18055) | 48394..50553 | - | 2160 | WP_000691811 | DotA/TraY family protein | traY |
| DBX29_RS18060 (DBX29_18060) | 50628..51197 | - | 570 | WP_000650752 | conjugal transfer protein TraX | - |
| DBX29_RS18065 (DBX29_18065) | 51194..52399 | - | 1206 | WP_001189548 | conjugal transfer protein TraW | traW |
| DBX29_RS18070 (DBX29_18070) | 52357..52977 | - | 621 | WP_000286855 | hypothetical protein | traV |
| DBX29_RS18075 (DBX29_18075) | 52977..56021 | - | 3045 | WP_001024769 | conjugal transfer protein | traU |
| DBX29_RS18085 (DBX29_18085) | 56316..57134 | - | 819 | WP_000753550 | hypothetical protein | traT |
| DBX29_RS27380 (DBX29_18090) | 57049..57300 | - | 252 | WP_001277573 | hypothetical protein | - |
| DBX29_RS18095 (DBX29_18095) | 57357..57755 | - | 399 | WP_000088813 | DUF6750 family protein | traR |
| DBX29_RS18100 (DBX29_18100) | 57802..58332 | - | 531 | WP_000987021 | conjugal transfer protein TraQ | traQ |
| DBX29_RS18105 (DBX29_18105) | 58329..59042 | - | 714 | WP_000787002 | conjugal transfer protein TraP | traP |
| DBX29_RS18110 (DBX29_18110) | 59039..60376 | - | 1338 | WP_001557492 | conjugal transfer protein TraO | traO |
| DBX29_RS18115 (DBX29_18115) | 60380..61354 | - | 975 | WP_000547386 | DotH/IcmK family type IV secretion protein | traN |
| DBX29_RS18120 (DBX29_18120) | 61365..62060 | - | 696 | WP_001287545 | DotI/IcmL family type IV secretion protein | traM |
| DBX29_RS18125 (DBX29_18125) | 62072..62422 | - | 351 | WP_068862892 | conjugal transfer protein | traL |
| DBX29_RS18130 (DBX29_18130) | 62439..66500 | - | 4062 | WP_000842456 | LPD7 domain-containing protein | - |
| DBX29_RS18135 (DBX29_18135) | 66564..66854 | - | 291 | WP_000817801 | IcmT/TraK family protein | traK |
| DBX29_RS18140 (DBX29_18140) | 66851..67999 | - | 1149 | WP_000775210 | plasmid transfer ATPase TraJ | virB11 |
| DBX29_RS18145 (DBX29_18145) | 67983..68819 | - | 837 | WP_000745049 | type IV secretory system conjugative DNA transfer family protein | traI |
| DBX29_RS18150 (DBX29_18150) | 68816..69274 | - | 459 | WP_001170111 | DotD/TraH family lipoprotein | - |
| DBX29_RS18155 (DBX29_18155) | 69378..70580 | - | 1203 | WP_000979993 | conjugal transfer protein TraF | - |
| DBX29_RS18160 (DBX29_18160) | 70682..71503 | - | 822 | WP_000845373 | hypothetical protein | traE |
| DBX29_RS27175 (DBX29_18165) | 71668..71862 | - | 195 | Protein_78 | integrase | - |
| DBX29_RS18170 (DBX29_18170) | 71976..73337 | - | 1362 | WP_001168171 | shufflon system plasmid conjugative transfer pilus tip adhesin PilV | - |
| DBX29_RS18175 (DBX29_18175) | 73355..73981 | - | 627 | WP_000939245 | prepilin peptidase | - |
| DBX29_RS18180 (DBX29_18180) | 73997..74482 | - | 486 | WP_001080767 | lytic transglycosylase domain-containing protein | virB1 |
| DBX29_RS18185 (DBX29_18185) | 74527..75063 | - | 537 | WP_000111534 | type 4 pilus major pilin | - |
| DBX29_RS18190 (DBX29_18190) | 75125..76219 | - | 1095 | WP_000697158 | type II secretion system F family protein | - |
| DBX29_RS18195 (DBX29_18195) | 76221..77729 | - | 1509 | WP_000880805 | ATPase, T2SS/T4P/T4SS family | virB11 |
| DBX29_RS18200 (DBX29_18200) | 77833..78291 | - | 459 | WP_000095885 | type IV pilus biogenesis protein PilP | - |
| DBX29_RS18205 (DBX29_18205) | 78281..79576 | - | 1296 | WP_000129882 | type 4b pilus protein PilO2 | - |
| DBX29_RS18210 (DBX29_18210) | 79597..81216 | - | 1620 | WP_001035565 | PilN family type IVB pilus formation outer membrane protein | - |
| DBX29_RS18215 (DBX29_18215) | 81248..81685 | - | 438 | WP_000539952 | type IV pilus biogenesis protein PilM | - |