T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 86107..115849
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| IL253_RS28215 (IL253_28220) | 82126..82482 | + | 357 | WP_019706019 | hypothetical protein | - |
| IL253_RS28220 (IL253_28225) | 82543..82755 | + | 213 | WP_019706020 | hypothetical protein | - |
| IL253_RS28225 (IL253_28230) | 82766..82990 | + | 225 | WP_014343499 | hypothetical protein | - |
| IL253_RS28230 (IL253_28235) | 83071..83391 | + | 321 | WP_015065521 | type II toxin-antitoxin system RelE/ParE family toxin | - |
| IL253_RS28235 (IL253_28240) | 83381..83659 | + | 279 | WP_020801586 | helix-turn-helix transcriptional regulator | - |
| IL253_RS28240 (IL253_28245) | 83660..84061 | + | 402 | WP_015065522 | helix-turn-helix domain-containing protein | - |
| IL253_RS28245 (IL253_28250) | 84890..85712 | + | 823 | Protein_110 | DUF932 domain-containing protein | - |
| IL253_RS28250 (IL253_28255) | 85745..86074 | + | 330 | WP_015065524 | DUF5983 family protein | - |
| IL253_RS28255 (IL253_28260) | 86107..86592 | - | 486 | WP_015065525 | transglycosylase SLT domain-containing protein | virB1 |
| IL253_RS28260 (IL253_28265) | 86983..87399 | + | 417 | WP_072145360 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| IL253_RS28265 (IL253_28270) | 87599..88318 | + | 720 | WP_015065526 | hypothetical protein | - |
| IL253_RS28270 (IL253_28275) | 88451..88654 | + | 204 | WP_171486139 | TraY domain-containing protein | - |
| IL253_RS28275 (IL253_28280) | 88719..89087 | + | 369 | WP_004194426 | type IV conjugative transfer system pilin TraA | - |
| IL253_RS28280 (IL253_28285) | 89101..89406 | + | 306 | WP_004144424 | type IV conjugative transfer system protein TraL | traL |
| IL253_RS28285 (IL253_28290) | 89426..89992 | + | 567 | WP_004144423 | type IV conjugative transfer system protein TraE | traE |
| IL253_RS28290 (IL253_28295) | 89979..90719 | + | 741 | WP_015065528 | type-F conjugative transfer system secretin TraK | traK |
| IL253_RS28295 (IL253_28300) | 90719..92143 | + | 1425 | WP_143438751 | F-type conjugal transfer pilus assembly protein TraB | traB |
| IL253_RS28300 (IL253_28305) | 92257..92841 | + | 585 | WP_004161368 | type IV conjugative transfer system lipoprotein TraV | traV |
| IL253_RS28305 (IL253_28310) | 93162..93858 | + | 697 | WP_228287025 | IS1-like element IS1B family transposase | - |
| IL253_RS28310 (IL253_28315) | 93876..94160 | + | 285 | Protein_123 | hypothetical protein | - |
| IL253_RS28315 (IL253_28320) | 94266..94484 | + | 219 | WP_004152501 | hypothetical protein | - |
| IL253_RS28320 (IL253_28325) | 94485..94796 | + | 312 | WP_004152502 | hypothetical protein | - |
| IL253_RS28325 (IL253_28330) | 94863..95267 | + | 405 | WP_004152503 | hypothetical protein | - |
| IL253_RS28330 (IL253_28335) | 95310..95699 | + | 390 | WP_004153076 | hypothetical protein | - |
| IL253_RS28335 (IL253_28340) | 95707..96105 | + | 399 | WP_011977783 | hypothetical protein | - |
| IL253_RS28340 (IL253_28345) | 96177..98816 | + | 2640 | WP_004152505 | type IV secretion system protein TraC | virb4 |
| IL253_RS28345 (IL253_28350) | 98816..99205 | + | 390 | WP_004152506 | type-F conjugative transfer system protein TrbI | - |
| IL253_RS28350 (IL253_28355) | 99205..99831 | + | 627 | WP_004152507 | type-F conjugative transfer system protein TraW | traW |
| IL253_RS28355 (IL253_28360) | 99873..100262 | + | 390 | WP_004152508 | hypothetical protein | - |
| IL253_RS28360 (IL253_28365) | 100259..101248 | + | 990 | WP_011977785 | conjugal transfer pilus assembly protein TraU | traU |
| IL253_RS28365 (IL253_28370) | 101261..101899 | + | 639 | WP_011977786 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| IL253_RS28370 (IL253_28375) | 101958..103913 | + | 1956 | WP_004152673 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| IL253_RS28375 (IL253_28380) | 103945..104199 | + | 255 | WP_004152674 | conjugal transfer protein TrbE | - |
| IL253_RS28380 (IL253_28385) | 104177..104425 | + | 249 | WP_004152675 | hypothetical protein | - |
| IL253_RS28385 (IL253_28390) | 104438..104764 | + | 327 | WP_004144402 | hypothetical protein | - |
| IL253_RS28390 (IL253_28395) | 104785..105537 | + | 753 | WP_020803149 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| IL253_RS28395 (IL253_28400) | 105548..105787 | + | 240 | WP_004152687 | type-F conjugative transfer system pilin chaperone TraQ | - |
| IL253_RS28400 (IL253_28405) | 105759..106331 | + | 573 | WP_023292147 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| IL253_RS28405 (IL253_28410) | 106324..106752 | + | 429 | WP_015065560 | hypothetical protein | - |
| IL253_RS28410 (IL253_28415) | 106739..108109 | + | 1371 | WP_004159274 | conjugal transfer pilus assembly protein TraH | traH |
| IL253_RS28415 (IL253_28420) | 108109..110952 | + | 2844 | WP_015065537 | conjugal transfer mating-pair stabilization protein TraG | traG |
| IL253_RS28420 (IL253_28425) | 110963..111487 | + | 525 | WP_015065538 | hypothetical protein | - |
| IL253_RS28425 (IL253_28430) | 111796..112527 | + | 732 | WP_032329926 | conjugal transfer complement resistance protein TraT | - |
| IL253_RS28430 (IL253_28435) | 112719..113408 | + | 690 | WP_015065540 | hypothetical protein | - |
| IL253_RS28435 (IL253_28440) | 113537..115849 | + | 2313 | WP_015065541 | type IV conjugative transfer system coupling protein TraD | virb4 |