T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 50562..77017
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| STU288_RS23780 (STU288_1p00355) | 49928..50155 | + | 228 | WP_000450265 | toxin-antitoxin system antitoxin VapB | - |
| STU288_RS23785 (STU288_1p00360) | 50155..50553 | + | 399 | WP_000911322 | type II toxin-antitoxin system VapC family toxin | - |
| STU288_RS23790 (STU288_1p00365) | 50562..52823 | - | 2262 | WP_015589607 | type IV conjugative transfer system coupling protein TraD | prgC |
| STU288_RS23795 (STU288_1p00370) | 53200..53931 | - | 732 | WP_000782438 | conjugal transfer complement resistance protein TraT | - |
| STU288_RS23800 (STU288_1p00375) | 53967..54461 | - | 495 | WP_010999946 | entry exclusion protein | - |
| STU288_RS23805 (STU288_1p00380) | 54477..57299 | - | 2823 | WP_001007086 | conjugal transfer mating-pair stabilization protein TraG | traG |
| STU288_RS23810 (STU288_1p00385) | 57296..58678 | - | 1383 | WP_001161719 | conjugal transfer pilus assembly protein TraH | traH |
| STU288_RS23815 (STU288_1p00390) | 58668..59216 | - | 549 | WP_000055840 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| STU288_RS23820 (STU288_1p00395) | 59203..59496 | - | 294 | WP_001233881 | type-F conjugative transfer system pilin chaperone TraQ | - |
| STU288_RS23825 (STU288_1p00400) | 59710..60459 | - | 750 | WP_001226854 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| STU288_RS23830 (STU288_1p00405) | 60471..60686 | - | 216 | WP_000700023 | conjugal transfer protein TrbE | - |
| STU288_RS23835 (STU288_1p00410) | 60697..62523 | - | 1827 | WP_000827528 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| STU288_RS23840 (STU288_1p00415) | 62520..62939 | - | 420 | WP_001229397 | HNH endonuclease signature motif containing protein | - |
| STU288_RS23845 (STU288_1p00420) | 62976..63614 | - | 639 | WP_000554823 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| STU288_RS23850 (STU288_1p00425) | 63599..63907 | - | 309 | WP_010999945 | hypothetical protein | - |
| STU288_RS23855 (STU288_1p00430) | 63926..64918 | - | 993 | WP_000833320 | conjugal transfer pilus assembly protein TraU | traU |
| STU288_RS23860 (STU288_1p00435) | 64915..65547 | - | 633 | WP_000871995 | type-F conjugative transfer system protein TraW | traW |
| STU288_RS23865 (STU288_1p00440) | 65544..65930 | - | 387 | WP_000105164 | type-F conjugative transfer system protein TrbI | - |
| STU288_RS23870 (STU288_1p00445) | 65905..68553 | - | 2649 | WP_000793310 | type IV secretion system protein TraC | virb4 |
| STU288_RS23875 (STU288_1p00450) | 68569..68832 | - | 264 | WP_001239256 | hypothetical protein | - |
| STU288_RS23880 (STU288_1p00460) | 68949..69416 | - | 468 | WP_000549562 | hypothetical protein | - |
| STU288_RS23885 (STU288_1p00465) | 69409..69630 | - | 222 | WP_001278699 | conjugal transfer protein TraR | - |
| STU288_RS23890 (STU288_1p00470) | 69765..70280 | - | 516 | WP_001079995 | type IV conjugative transfer system lipoprotein TraV | traV |
| STU288_RS23895 (STU288_1p00475) | 70277..70522 | - | 246 | WP_010999944 | DUF2689 domain-containing protein | virb4 |
| STU288_RS23900 (STU288_1p00480) | 70500..71096 | - | 597 | WP_000527896 | conjugal transfer pilus-stabilizing protein TraP | - |
| STU288_RS23905 (STU288_1p00485) | 71086..72507 | - | 1422 | WP_000146700 | F-type conjugal transfer pilus assembly protein TraB | traB |
| STU288_RS23910 (STU288_1p00490) | 72507..73247 | - | 741 | WP_001230719 | type-F conjugative transfer system secretin TraK | traK |
| STU288_RS23915 (STU288_1p00495) | 73234..73800 | - | 567 | WP_000399769 | type IV conjugative transfer system protein TraE | traE |
| STU288_RS23920 (STU288_1p00500) | 73822..74133 | - | 312 | WP_000012129 | type IV conjugative transfer system protein TraL | traL |
| STU288_RS23925 (STU288_1p00505) | 74148..74510 | - | 363 | WP_001274201 | type IV conjugative transfer system pilin TraA | - |
| STU288_RS23930 (STU288_1p00510) | 74552..74779 | - | 228 | WP_001676655 | conjugal transfer relaxosome protein TraY | - |
| STU288_RS23935 (STU288_1p00515) | 74873..75559 | - | 687 | WP_000336297 | PAS domain-containing protein | - |
| STU288_RS23940 (STU288_1p00520) | 75752..76132 | - | 381 | WP_001151546 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| STU288_RS23945 (STU288_1p00525) | 76547..77017 | + | 471 | WP_001526856 | transglycosylase SLT domain-containing protein | virB1 |
| STU288_RS27435 | 77329..78147 | - | 819 | Protein_96 | DUF945 domain-containing protein | - |
| STU288_RS27345 (STU288_1p00545) | 78250..78408 | - | 159 | WP_001704449 | hypothetical protein | - |
| STU288_RS23960 (STU288_1p00555) | 78657..79394 | - | 738 | WP_000581933 | plasmid SOS inhibition protein A | - |
| STU288_RS23965 (STU288_1p00560) | 79391..79825 | - | 435 | WP_010999943 | conjugation system SOS inhibitor PsiB | - |
| STU288_RS23970 (STU288_1p00565) | 79865..81862 | - | 1998 | WP_000117513 | ParB/RepB/Spo0J family partition protein | - |