T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 43537..69953
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV187_RS28885 (HV187_28895) | 39577..39810 | - | 234 | WP_001191893 | hypothetical protein | - |
| HV187_RS28890 (HV187_28900) | 39792..40409 | - | 618 | WP_079778879 | hypothetical protein | - |
| HV187_RS28895 (HV187_28905) | 40577..43540 | + | 2964 | WP_000909947 | MobH family relaxase | - |
| HV187_RS28900 (HV187_28910) | 43537..45402 | + | 1866 | WP_000178858 | conjugative transfer system coupling protein TraD | virb4 |
| HV187_RS28905 (HV187_28915) | 45452..45997 | + | 546 | WP_023356350 | hypothetical protein | - |
| HV187_RS28910 (HV187_28920) | 45954..46583 | + | 630 | WP_000743448 | DUF4400 domain-containing protein | tfc7 |
| HV187_RS28915 (HV187_28925) | 46594..47040 | + | 447 | WP_000122583 | hypothetical protein | - |
| HV187_RS28920 (HV187_28930) | 47050..47427 | + | 378 | WP_000869260 | hypothetical protein | - |
| HV187_RS28925 (HV187_28935) | 47427..48089 | + | 663 | WP_000045163 | hypothetical protein | - |
| HV187_RS28930 (HV187_28940) | 48268..48411 | + | 144 | WP_023356351 | hypothetical protein | - |
| HV187_RS28935 (HV187_28945) | 48424..48771 | + | 348 | WP_001102160 | hypothetical protein | - |
| HV187_RS28940 (HV187_28950) | 48914..49195 | + | 282 | WP_099360026 | type IV conjugative transfer system protein TraL | traL |
| HV187_RS28945 (HV187_28955) | 49192..49818 | + | 627 | WP_001049718 | TraE/TraK family type IV conjugative transfer system protein | traE |
| HV187_RS28950 (HV187_28960) | 49802..50719 | + | 918 | WP_000839951 | type-F conjugative transfer system secretin TraK | traK |
| HV187_RS28955 (HV187_28965) | 50716..52032 | + | 1317 | WP_000595204 | TraB/VirB10 family protein | traB |
| HV187_RS28960 (HV187_28970) | 52029..52607 | + | 579 | WP_000794193 | type IV conjugative transfer system lipoprotein TraV | traV |
| HV187_RS28965 (HV187_28975) | 52611..53003 | + | 393 | WP_012766327 | TraA family conjugative transfer protein | - |
| HV187_RS28970 (HV187_28980) | 53067..54269 | - | 1203 | WP_081843999 | ISL3-like element ISAeme19 family transposase | - |
| HV187_RS28975 (HV187_28985) | 54516..60002 | + | 5487 | WP_079778880 | Ig-like domain-containing protein | - |
| HV187_RS28980 (HV187_28990) | 60151..60858 | + | 708 | WP_001259344 | DsbC family protein | - |
| HV187_RS28985 (HV187_28995) | 60855..63302 | + | 2448 | WP_000587426 | type IV secretion system protein TraC | virb4 |
| HV187_RS28990 (HV187_29000) | 63317..63634 | + | 318 | WP_000364398 | hypothetical protein | - |
| HV187_RS28995 (HV187_29005) | 63631..64161 | + | 531 | WP_000672456 | S26 family signal peptidase | - |
| HV187_RS29000 (HV187_29010) | 64124..65392 | + | 1269 | WP_001553264 | TrbC family F-type conjugative pilus assembly protein | traW |
| HV187_RS29005 (HV187_29015) | 65389..66066 | + | 678 | WP_000577801 | EAL domain-containing protein | - |
| HV187_RS29010 (HV187_29020) | 66060..67064 | + | 1005 | WP_000911304 | TraU family protein | traU |
| HV187_RS29015 (HV187_29025) | 67215..69953 | + | 2739 | WP_001256493 | conjugal transfer mating pair stabilization protein TraN | traN |
| HV187_RS29020 (HV187_29030) | 69992..70852 | - | 861 | WP_000679674 | hypothetical protein | - |
| HV187_RS29025 (HV187_29035) | 70964..71614 | - | 651 | WP_181248424 | hypothetical protein | - |
| HV187_RS29030 (HV187_29040) | 71905..72225 | + | 321 | WP_000547567 | hypothetical protein | - |
| HV187_RS29035 (HV187_29045) | 72657..73061 | + | 405 | WP_009309932 | transposase | - |
| HV187_RS29040 (HV187_29050) | 73058..73408 | + | 351 | WP_009309933 | IS66 family insertion sequence element accessory protein TnpB | - |