T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 46832..75725
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV173_RS26540 (HV173_26545) | 41929..42252 | + | 324 | WP_008324183 | hypothetical protein | - |
| HV173_RS27650 | 42314..42454 | + | 141 | WP_016247538 | hypothetical protein | - |
| HV173_RS27655 | 42482..42673 | + | 192 | WP_231371985 | hypothetical protein | - |
| HV173_RS26550 (HV173_26555) | 43300..43674 | + | 375 | WP_008324180 | hypothetical protein | - |
| HV173_RS26555 (HV173_26560) | 43728..44015 | + | 288 | WP_008324178 | hypothetical protein | - |
| HV173_RS26560 (HV173_26565) | 44062..44406 | + | 345 | WP_008324177 | hypothetical protein | - |
| HV173_RS26565 (HV173_26570) | 44492..44755 | + | 264 | WP_008324174 | hypothetical protein | - |
| HV173_RS26570 (HV173_26575) | 44798..45628 | + | 831 | WP_181549190 | N-6 DNA methylase | - |
| HV173_RS26575 (HV173_26580) | 46255..46785 | + | 531 | WP_008324170 | antirestriction protein | - |
| HV173_RS26580 (HV173_26585) | 46832..47308 | - | 477 | WP_008324168 | transglycosylase SLT domain-containing protein | virB1 |
| HV173_RS26585 (HV173_26590) | 47740..48132 | + | 393 | WP_008324167 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HV173_RS26590 (HV173_26595) | 48321..49010 | + | 690 | WP_008324166 | hypothetical protein | - |
| HV173_RS26595 (HV173_26600) | 49097..49321 | + | 225 | WP_008324165 | TraY domain-containing protein | - |
| HV173_RS26600 (HV173_26605) | 49379..49729 | + | 351 | WP_016247536 | type IV conjugative transfer system pilin TraA | - |
| HV173_RS26605 (HV173_26610) | 49880..50185 | + | 306 | WP_008324160 | type IV conjugative transfer system protein TraL | traL |
| HV173_RS26610 (HV173_26615) | 50200..50766 | + | 567 | WP_016247535 | type IV conjugative transfer system protein TraE | traE |
| HV173_RS26615 (HV173_26620) | 50753..51496 | + | 744 | WP_008324157 | type-F conjugative transfer system secretin TraK | traK |
| HV173_RS26620 (HV173_26625) | 51483..52877 | + | 1395 | WP_008324156 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HV173_RS26625 (HV173_26630) | 52899..53438 | + | 540 | WP_016247533 | type IV conjugative transfer system lipoprotein TraV | traV |
| HV173_RS26630 (HV173_26635) | 53558..53782 | + | 225 | WP_016247532 | TraR/DksA C4-type zinc finger protein | - |
| HV173_RS26635 (HV173_26640) | 53786..53923 | + | 138 | WP_016247531 | hypothetical protein | - |
| HV173_RS26640 (HV173_26645) | 53955..54356 | + | 402 | WP_008324137 | hypothetical protein | - |
| HV173_RS26645 (HV173_26650) | 54346..54912 | + | 567 | WP_008324135 | conjugal transfer pilus-stabilizing protein TraP | - |
| HV173_RS26650 (HV173_26655) | 54905..57535 | + | 2631 | WP_016247530 | type IV secretion system protein TraC | virb4 |
| HV173_RS26655 (HV173_26660) | 57532..57879 | + | 348 | WP_008324133 | type-F conjugative transfer system protein TrbI | - |
| HV173_RS26660 (HV173_26665) | 57879..58526 | + | 648 | WP_008324132 | type-F conjugative transfer system protein TraW | traW |
| HV173_RS26665 (HV173_26670) | 58529..59515 | + | 987 | WP_032160671 | conjugal transfer pilus assembly protein TraU | traU |
| HV173_RS26670 (HV173_26675) | 59532..60161 | + | 630 | WP_008324130 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HV173_RS26675 (HV173_26680) | 60158..62011 | + | 1854 | WP_016247529 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HV173_RS26680 (HV173_26685) | 62043..62231 | + | 189 | WP_008324128 | conjugal transfer protein TrbE | - |
| HV173_RS26685 (HV173_26690) | 62262..63011 | + | 750 | WP_008324127 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HV173_RS26690 (HV173_26695) | 63028..63276 | + | 249 | WP_008324126 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HV173_RS26695 (HV173_26700) | 63266..63820 | + | 555 | WP_016247528 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HV173_RS26700 (HV173_26705) | 63969..64574 | - | 606 | WP_000509966 | recombinase family protein | - |
| HV173_RS26705 (HV173_26710) | 64669..67566 | + | 2898 | WP_001553819 | Tn3-like element Tn5403 family transposase | - |
| HV173_RS26710 (HV173_26715) | 67542..67910 | + | 369 | WP_249417279 | conjugal transfer protein TrbF | - |
| HV173_RS26715 (HV173_26720) | 67897..69267 | + | 1371 | WP_016247527 | conjugal transfer pilus assembly protein TraH | traH |
| HV173_RS26720 (HV173_26725) | 69267..72089 | + | 2823 | WP_032432555 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HV173_RS26725 (HV173_26730) | 72111..72542 | + | 432 | WP_008324118 | entry exclusion protein | - |
| HV173_RS26730 (HV173_26735) | 72617..73291 | + | 675 | WP_016247525 | tetratricopeptide repeat protein | - |
| HV173_RS26735 (HV173_26740) | 73425..75725 | + | 2301 | WP_181549191 | type IV conjugative transfer system coupling protein TraD | prgC |