T4SS
T4SS
T4SS were predicted by using oriTfinder2.
Location: 41188..65068
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| HV252_RS32010 (HV252_32015) | 37548..38090 | + | 543 | WP_020804853 | antirestriction protein | - |
| HV252_RS32015 (HV252_32020) | 38113..38535 | - | 423 | WP_020315406 | transglycosylase SLT domain-containing protein | - |
| HV252_RS32020 (HV252_32025) | 39029..39427 | + | 399 | WP_064174027 | conjugal transfer relaxosome DNA-binding protein TraM | - |
| HV252_RS32025 (HV252_32030) | 39601..40287 | + | 687 | WP_064174026 | transcriptional regulator TraJ family protein | - |
| HV252_RS32030 (HV252_32035) | 40366..40752 | + | 387 | WP_064174025 | TraY domain-containing protein | - |
| HV252_RS32035 (HV252_32040) | 40806..41174 | + | 369 | WP_020316649 | type IV conjugative transfer system pilin TraA | - |
| HV252_RS32040 (HV252_32045) | 41188..41493 | + | 306 | WP_004178059 | type IV conjugative transfer system protein TraL | traL |
| HV252_RS32045 (HV252_32050) | 41513..42079 | + | 567 | WP_020316627 | type IV conjugative transfer system protein TraE | traE |
| HV252_RS32050 (HV252_32055) | 42066..42806 | + | 741 | WP_064174024 | type-F conjugative transfer system secretin TraK | traK |
| HV252_RS32055 (HV252_32060) | 42806..44230 | + | 1425 | WP_042946342 | F-type conjugal transfer pilus assembly protein TraB | traB |
| HV252_RS32060 (HV252_32065) | 44223..44819 | + | 597 | WP_023340943 | conjugal transfer pilus-stabilizing protein TraP | - |
| HV252_RS32065 (HV252_32070) | 44842..45411 | + | 570 | WP_181511930 | type IV conjugative transfer system lipoprotein TraV | traV |
| HV252_RS32070 (HV252_32075) | 45543..45953 | + | 411 | WP_023316400 | hypothetical protein | - |
| HV252_RS32075 (HV252_32080) | 45958..46242 | + | 285 | WP_023316401 | hypothetical protein | - |
| HV252_RS32080 (HV252_32085) | 46266..46484 | + | 219 | WP_181511931 | hypothetical protein | - |
| HV252_RS32085 (HV252_32090) | 46485..46796 | + | 312 | WP_023316403 | hypothetical protein | - |
| HV252_RS32090 (HV252_32095) | 46863..47267 | + | 405 | WP_023316404 | hypothetical protein | - |
| HV252_RS32095 (HV252_32100) | 47264..47554 | + | 291 | WP_020323516 | hypothetical protein | - |
| HV252_RS32100 (HV252_32105) | 47562..47960 | + | 399 | WP_072156904 | hypothetical protein | - |
| HV252_RS32105 (HV252_32110) | 48032..50671 | + | 2640 | WP_040212846 | type IV secretion system protein TraC | virb4 |
| HV252_RS32110 (HV252_32115) | 50671..51060 | + | 390 | WP_021312677 | type-F conjugative transfer system protein TrbI | - |
| HV252_RS32115 (HV252_32120) | 51060..51686 | + | 627 | WP_020314628 | type-F conjugative transfer system protein TraW | traW |
| HV252_RS32120 (HV252_32125) | 51730..52689 | + | 960 | WP_029497356 | conjugal transfer pilus assembly protein TraU | traU |
| HV252_RS32125 (HV252_32130) | 52702..53340 | + | 639 | WP_020321224 | type-F conjugative transfer system pilin assembly protein TrbC | trbC |
| HV252_RS32130 (HV252_32135) | 53399..55354 | + | 1956 | WP_020803160 | type-F conjugative transfer system mating-pair stabilization protein TraN | traN |
| HV252_RS32135 (HV252_32140) | 55387..55668 | + | 282 | WP_022644736 | hypothetical protein | - |
| HV252_RS32140 (HV252_32145) | 55658..55885 | + | 228 | WP_012540032 | conjugal transfer protein TrbE | - |
| HV252_RS32145 (HV252_32150) | 55896..56222 | + | 327 | WP_020323521 | hypothetical protein | - |
| HV252_RS32150 (HV252_32155) | 56243..56995 | + | 753 | WP_064174011 | type-F conjugative transfer system pilin assembly protein TraF | traF |
| HV252_RS32155 (HV252_32160) | 57006..57245 | + | 240 | WP_020315123 | type-F conjugative transfer system pilin chaperone TraQ | - |
| HV252_RS32160 (HV252_32165) | 57217..57792 | + | 576 | WP_020315129 | type-F conjugative transfer system pilin assembly thiol-disulfide isomerase TrbB | traF |
| HV252_RS32165 (HV252_32170) | 57779..59149 | + | 1371 | WP_020315127 | conjugal transfer pilus assembly protein TraH | traH |
| HV252_RS32170 (HV252_32175) | 59149..61998 | + | 2850 | WP_064174012 | conjugal transfer mating-pair stabilization protein TraG | traG |
| HV252_RS32175 (HV252_32180) | 62004..62531 | + | 528 | WP_020315130 | hypothetical protein | - |
| HV252_RS32180 (HV252_32185) | 62768..65068 | + | 2301 | WP_064174013 | type IV conjugative transfer system coupling protein TraD | virb4 |